RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CELP19835 753 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 DSC2Q02487 901 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 DYRK1AQ13627 763 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 NELL2Q99435 816 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 EVLQ9UI08 416 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 PEX14O75381 377 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 TAS2R39P59534 338 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 IRF9Q00978 393 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 BRAT1Q6PJG6 821 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ALDH16A1Q8IZ83 802 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 TRAM1L1Q8N609 369 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 IQCF1Q8N6M8 205 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 OR6N2Q8NGY6 317 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 HAPLN3Q96S86 360 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 IL25Q9H293 177 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 C14orf119Q9NWQ9 140 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 CYB5BO43169 146 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 TLL1O43897 1013 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF821O75541 412 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SNAP29O95721 258 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SHMT1P34896 483 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 RIDAP52758 137 aaKnown RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 BEX3Q00994 111 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 PYCR2Q96C36 320 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF136P52737 540 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 OC90Q02509 493 aaPredicted RBP8.97□□□□□ -0.97
VPS13A-203ENST00000360280 C7orf57Q8NEG2 295 aa8.97□□□□□ -0.97
VPS13A-203ENST00000360280 SMIM35A0A1B0GVV1 85 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 C20orf202A1L168 122 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 PIP5K1CO60331 668 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 DNAJC19Q96DA6 116 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 H2BFMP0C1H6 154 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 GNSP15586 552 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 ART1P52961 327 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 HADHBP55084 474 aaKnown RBP8.96□□□□□ -0.97
VPS13A-203ENST00000360280 GDPD1Q8N9F7 314 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 TM9SF4Q92544 642 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 SDHAF2Q9NX18 166 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 DIP2CQ9Y2E4 1556 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 KCNQ2O43526 872 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 SGCEO43556 437 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 SCGB1D1O95968 90 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 OPN1SWP03999 348 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 CKMT2P17540 419 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 ABHD18Q0P651 414 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 CYBRD1Q53TN4 286 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 COQ5Q5HYK3 327 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 GPR152Q8TDT2 470 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 MYLIPQ8WY64 445 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 BCL7BQ9BQE9 202 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 TTC3P53804 2025 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 KLF11O14901 512 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 SPDEFO95238 335 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 TPT1P13693 172 aaKnown RBP8.96□□□□□ -0.97
VPS13A-203ENST00000360280 PITPNBP48739 271 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 JAM2P57087 298 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 BCL2L15Q5TBC7 163 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 C22orf42Q6IC83 251 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 TCEANCQ8N8B7 351 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 DEDD2Q8WXF8 326 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 GPN2Q9H9Y4 310 aaPredicted RBP8.96□□□□□ -0.97
VPS13A-203ENST00000360280 TP53TG5Q9Y2B4 290 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 F5H5P2 479 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 ENPP3O14638 875 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 ADRB3P13945 408 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 OR1J4Q8NGS1 313 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 OR5H2Q8NGV7 314 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 EMID1Q96A84 441 aaPredicted RBP8.96□□□□□ -0.97
VPS13A-203ENST00000360280 KCNJ16Q9NPI9 418 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 PRMT8Q9NR22 394 aaPredicted RBP8.96□□□□□ -0.97
VPS13A-203ENST00000360280 ARHGAP23Q9P227 1491 aa8.96□□□□□ -0.97
VPS13A-203ENST00000360280 GSK3BP49841 420 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 ERVK-25P63136 954 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 FKBP1CQ5VVH2 108 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 LRRTM4Q86VH4 590 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 LPPQ93052 612 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 RXFP3Q9NSD7 469 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 QPCTLQ9NXS2 382 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 BACE2Q9Y5Z0 518 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 DNMT3AQ9Y6K1 912 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 PFKLP17858 780 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 CDKN1CP49918 316 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 FLYWCH1Q4VC44 716 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 EARS2Q5JPH6 523 aaKnown RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 CCBE1Q6UXH8 406 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 PLCXD1Q9NUJ7 323 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 SLC35F4A4IF30 521 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 FUT4P22083 530 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 TAF10Q12962 218 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 DPYSL2Q16555 572 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 TEX10Q9NXF1 929 aaPredicted RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 ERI3O43414 337 aaKnown RBP8.96□□□□□ -0.98
VPS13A-203ENST00000360280 SEC14L2O76054 403 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 CXCL17Q6UXB2 119 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 THAP4Q8WY91 577 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 HAS2Q92819 552 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 HEBP1Q9NRV9 189 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 KIF25Q9UIL4 384 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 WDR45Q9Y484 360 aa8.96□□□□□ -0.98
VPS13A-203ENST00000360280 FAM199XQ6PEV8 388 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms