RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 A8MU76 341 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 MTX2O75431 263 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 CKMP06732 381 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 MAGP20916 626 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 RCVRNP35243 200 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 PSPHP78330 225 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 C2orf80Q0P641 193 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 C12orf73Q69YU5 71 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.9■□□□□ 0.35e-9■■■□□ 16.5
RTN4-204ENST00000357732 TMPRSS11BQ86T26 416 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 ZNF557Q8N988 423 aaPredicted RBP16.9■□□□□ 0.3
RTN4-204ENST00000357732 OR8J1Q8NGP2 316 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 CD99L2Q8TCZ2 262 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 RAET1EQ8TD07 263 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 AUTS2Q8WXX7 1259 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 UBE2E3Q969T4 207 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 MIR1-1HGQ9H1L0 117 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 EPHX3Q9H6B9 360 aa16.9■□□□□ 0.3
RTN4-204ENST00000357732 FAAHO00519 579 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 PDE9AO76083 593 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 C1GALT1C1LP0DN25 315 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 POU2F1P14859 743 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 NKX2-5P52952 324 aaPredicted RBP16.89■□□□□ 0.3
RTN4-204ENST00000357732 CCL23P55773 120 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 SMIM11AP58511 58 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 CYP4F8P98187 520 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 OCLNQ16625 522 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 ZNF284Q2VY69 593 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 LRRC73Q5JTD7 316 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 ADNP2Q6IQ32 1131 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 ARMCX6Q7L4S7 300 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 NRARPQ7Z6K4 114 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 RASSF5Q8WWW0 418 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 ASB15Q8WXK1 588 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 A4GALTQ9NPC4 353 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 RAB23Q9ULC3 237 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 MAP4K5Q9Y4K4 846 aa16.89■□□□□ 0.3
RTN4-204ENST00000357732 TSPAN11A1L157 253 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 OR2AG2A6NM03 316 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SEC14L5O43304 696 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 TSPAN6O43657 245 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 ALDH1A1P00352 501 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 IL1AP01583 271 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 INHAP05111 366 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 CTSAP10619 480 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 HLA-FP30511 346 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 RPS19P39019 145 aaKnown RBP16.89■□□□□ 0.29
RTN4-204ENST00000357732 CRYBB2P43320 205 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SCN1BQ07699 218 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 MPEG1Q2M385 716 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 ZFP69Q49AA0 526 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SLC25A30Q5SVS4 291 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 HSD11B1LQ7Z5J1 315 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 CLDN22Q8N7P3 220 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SIMC1Q8NDZ2 872 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SCAMP4Q969E2 229 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 KIAA1143Q96AT1 154 aaPredicted RBP16.89■□□□□ 0.29
RTN4-204ENST00000357732 CNPPD1Q9BV87 410 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SGPP1Q9BX95 441 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 NLNQ9BYT8 704 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SRRQ9GZT4 340 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 PRM3Q9NNZ6 103 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 C14orf119Q9NWQ9 140 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 REV1Q9UBZ9 1251 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 SSR3Q9UNL2 185 aa16.89■□□□□ 0.29
RTN4-204ENST00000357732 HMX3A6NHT5 357 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 CENPXA8MT69 81 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 ENTPD6O75354 484 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 CSO75390 466 aaKnown RBP16.88■□□□□ 0.29
RTN4-204ENST00000357732 RECKO95980 971 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 ADRA2AP08913 450 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 BDKRB1P46663 353 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 ASAH1Q13510 395 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 MFSD4BQ5TF39 518 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 CASP12Q6UXS9 341 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 VN1R5Q7Z5H4 357 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 NANOGP1Q8N7R0 232 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 SYNDIG1Q9H7V2 258 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 ITM2CQ9NQX7 267 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 CMAHPQ9Y471 501 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 TMEM202A6NGA9 273 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 M0R129 80 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 RGS5O15539 181 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 SCO2O43819 266 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 TBX19O60806 448 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 RECQLP46063 649 aaPredicted RBP16.88■□□□□ 0.29
RTN4-204ENST00000357732 TBPL1P62380 186 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 ALDH6A1Q02252 535 aaKnown RBP16.88■□□□□ 0.29
RTN4-204ENST00000357732 SLBPQ14493 270 aaKnown RBP eCLIP16.88■□□□□ 0.29
RTN4-204ENST00000357732 GANABQ14697 944 aaKnown RBP16.88■□□□□ 0.29
RTN4-204ENST00000357732 SPATC1Q76KD6 591 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 OTOP2Q7RTS6 562 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 DEFB128Q7Z7B8 93 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 CIDECQ96AQ7 238 aaPredicted RBP16.88■□□□□ 0.29
RTN4-204ENST00000357732 BARHL1Q9BZE3 327 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 SLC22A4Q9H015 551 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 EXOSC4Q9NPD3 245 aaKnown RBP16.88■□□□□ 0.29
RTN4-204ENST00000357732 SLC6A14Q9UN76 642 aa16.88■□□□□ 0.29
RTN4-204ENST00000357732 PIPSLA2A3N6 862 aa16.87■□□□□ 0.29
RTN4-204ENST00000357732 URODP06132 367 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms