RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 OR9A4Q8NGU2 314 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 ZNF563Q8TA94 476 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SFXN5Q8TD22 340 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 GPR151Q8TDV0 419 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 CT55Q8WUE5 264 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SLC9A6Q92581 669 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 KCTD14Q9BQ13 255 aaPredicted RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 TMEM79Q9BSE2 394 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 SLAMF7Q9NQ25 335 aa8.72□□□□□ -1.01
UPF2-202ENST00000357604 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
UPF2-202ENST00000357604 TRBV11-1A0A0K0K1C0 115 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 OR2A25A4D2G3 310 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 FAM149AA5PLN7 773 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 ME2P23368 584 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 GABRB3P28472 473 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 CCR4P51679 360 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 ZNF41P51814 821 aaPredicted RBP8.71□□□□□ -1.01
UPF2-202ENST00000357604 ABRAXAS2Q15018 415 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 SFT2D3Q587I9 215 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 FAM13CQ8NE31 585 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 OR7G3Q8NG95 312 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 OR1L3Q8NH93 324 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 C16orf78Q8WTQ4 265 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 MS4A8Q9BY19 250 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 SLC6A20Q9NP91 592 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 PARD6AQ9NPB6 346 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 LHX9Q9NQ69 397 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 TSC22D4Q9Y3Q8 395 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 ARGFXA6NJG6 315 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 MAGEB17A8MXT2 336 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 GDF9O60383 454 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 IFNGR2P38484 337 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 BNC1Q01954 994 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 NR1D2Q14995 579 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 DEPDC1Q5TB30 811 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 TMEM198Q66K66 360 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 TMEM102Q8N9M5 508 aaPredicted RBP8.71□□□□□ -1.01
UPF2-202ENST00000357604 RP9Q8TA86 221 aaKnown RBP8.71□□□□□ -1.01
UPF2-202ENST00000357604 VPS33AQ96AX1 596 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 SLC41A2Q96JW4 573 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 SLC30A3Q99726 388 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 PNPOQ9NVS9 261 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 ZNF358Q9NW07 568 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 KLF15Q9UIH9 416 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 CROTQ9UKG9 612 aa8.71□□□□□ -1.01
UPF2-202ENST00000357604 GYG2O15488 501 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 CTNSO60931 367 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 REM1O75628 298 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 CYP7B1O75881 506 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 IL3P08700 152 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 NEK2P51955 445 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 C18orf21Q32NC0 220 aaPredicted RBP8.71□□□□□ -1.02
UPF2-202ENST00000357604 RHBDD2Q6NTF9 364 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 P4HA3Q7Z4N8 544 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 DNAJC22Q8N4W6 341 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 NSL1Q96IY1 281 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 RNF145Q96MT1 663 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 OCIAD1Q9NX40 245 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 DLGAP4Q9Y2H0 992 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 MSRB2Q9Y3D2 182 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 GREB1Q4ZG55 1949 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 MRASO14807 208 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 KLK8O60259 260 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 HPP00738 406 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 PRDX6P30041 224 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 OR1D4P47884 311 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 NCF4Q15080 339 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 NOXRED1Q6NXP6 359 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 FAM180AQ6UWF9 173 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 FKBP9P1Q75LS8 142 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 METTL4Q8N3J2 472 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 TEX19Q8NA77 164 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 RUBCNLQ9H714 662 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 MEAF6Q9HAF1 191 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 BOKQ9UMX3 212 aaPredicted RBP8.71□□□□□ -1.02
UPF2-202ENST00000357604 ANAPC1Q9H1A4 1944 aa8.71□□□□□ -1.02
UPF2-202ENST00000357604 SCAMP2O15127 329 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 C7P10643 843 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 FOLR1P15328 257 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 RPS3AP61247 264 aaKnown RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 POU6F2P78424 691 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 CLEC14AQ86T13 490 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 SLC44A2Q8IWA5 706 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 LAS2Q8IYD9 372 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 OR6Y1Q8NGX8 325 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 ERP27Q96DN0 273 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 RBCK1Q9BYM8 510 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 PTGFRNQ9P2B2 879 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 HEY2Q9UBP5 337 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 RPS6KA6Q9UK32 745 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 KIAA1549LQ6ZVL6 1849 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 IGHV5-51A0A0C4DH38 117 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 C2orf92A0A1B0GVN3 265 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 A6NL46 340 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 GJE1A6NN92 205 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 MEN1O00255 615 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 CDC123O75794 336 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 DDCP20711 480 aa8.7□□□□□ -1.02
UPF2-202ENST00000357604 GABPB1Q06547 395 aaPredicted RBP8.7□□□□□ -1.02
UPF2-202ENST00000357604 FCRL6Q6DN72 434 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms