RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ABHD12BQ7Z5M8 362 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GALNT12Q8IXK2 581 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NIPA2Q8N8Q9 360 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GNPDA2Q8TDQ7 276 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 S100A16Q96FQ6 103 aaKnown RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 HERC2P3Q9BVR0 1158 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 KCNK13Q9HB14 408 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ATPIF1Q9UII2 106 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 EXOSC1Q9Y3B2 195 aaKnown RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ANKRD28O15084 1053 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CYB5BO43169 146 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 AK1P00568 194 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 THBS2P35442 1172 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GGT2P36268 569 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 RABIFP47224 123 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CDK6Q00534 326 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ARHGAP1Q07960 439 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ODF4Q2M2E3 257 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ABHD17BQ5VST6 288 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM53Q6P2H8 277 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 BAIAP2L2Q6UXY1 529 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CMTM8Q8IZV2 173 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CSNK1A1LQ8N752 337 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 TFAP2BQ92481 460 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PGAM5Q96HS1 289 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ARL5BQ96KC2 179 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 HBEGFQ99075 208 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NSUN3Q9H649 340 aaKnown RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 MLXQ9UH92 298 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 RREB1Q92766 1687 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 J3QLW9 94 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CER1O95813 267 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF19P17023 458 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 UGT1A4P22310 534 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GCH1P30793 250 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 HOXC8P31273 242 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GPR143P51810 404 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NR0B2Q15466 257 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PLEKHG7Q6ZR37 379 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NCCRP1Q6ZVX7 275 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CYS1Q717R9 158 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 UTS2BQ765I0 119 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ANKLE1Q8NAG6 615 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 TOR1AIP2Q8NFQ8 470 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PHB2Q99623 299 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 DHRS4Q9BTZ2 278 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 TMED9Q9BVK6 235 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 SMG9Q9H0W8 520 aaKnown RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NLE1Q9NVX2 485 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 B3GNT3Q9Y2A9 372 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CAPN8A6NHC0 703 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 VSTM2BA6NLU5 285 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 SLC19A2O60779 497 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CDC123O75794 336 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CD48P09326 243 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CREB1P16220 341 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 UGT2B10P36537 528 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 MCCD1P59942 119 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ACTC1P68032 377 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ACTA1P68133 377 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PSPHP78330 225 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 FAM76BQ5HYJ3 339 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ANKRD22Q5VYY1 191 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 LPCAT4Q643R3 524 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 OR8H3Q8N146 312 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 OR9A4Q8NGU2 314 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 OR14L1PQ8NHC6 308 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CLEC4DQ8WXI8 215 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NSMAFQ92636 917 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GIMAP5Q96F15 307 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CDK15Q96Q40 435 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PKP4Q99569 1192 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 YTHDF1Q9BYJ9 559 aaKnown RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 DPAGT1Q9H3H5 408 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 FXYD6-FXYD2A0A087WZ82 144 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 MTMR11A4FU01 709 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 H7C417 338 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 SLC22A1O15245 554 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CAPN5O15484 640 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PPP1R11O60927 126 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 LEFTY1O75610 366 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GLSO94925 669 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 MT-ND1P03886 318 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 RHOP08100 348 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 S100A7P31151 101 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 SLC10A6Q3KNW5 377 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 LY6G5CQ5SRR4 150 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 RNF130Q86XS8 419 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 OR6N2Q8NGY6 317 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 COQ8AQ8NI60 647 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ZDHHC1Q8WTX9 485 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PYCR2Q96C36 320 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 FXYD6Q9H0Q3 95 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 OXSMQ9NWU1 459 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 KCNN3Q9UGI6 736 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 SLC22A14Q9Y267 594 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 LOC100509620A0A075B734 347 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms