RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 MED26O95402 600 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 HPCAL1P37235 193 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 POLE2P56282 527 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 MRPS21P82921 87 aaKnown RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 PRMT9Q6P2P2 845 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 EFHD1Q9BUP0 239 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
LSS-201ENST00000356396 SCOCQ9UIL1 159 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 PCDHB11Q9Y5F2 797 aa13.17□□□□□ -0.3
LSS-201ENST00000356396 PRAMEF27A3QJZ7 478 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
LSS-201ENST00000356396 MAPK1P28482 360 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 KDELR2P33947 212 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 BNIP2Q12982 314 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 FAM98BQ52LJ0 330 aaKnown RBP13.16□□□□□ -0.3
LSS-201ENST00000356396 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 GLB1L3Q8NCI6 653 aaPredicted RBP13.16□□□□□ -0.3
LSS-201ENST00000356396 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.16□□□□□ -0.3
LSS-201ENST00000356396 TESCQ96BS2 214 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 MS4A6EQ96DS6 147 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 ADNPQ9H2P0 1102 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 C1orf226A1L170 272 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 NDUFS2O75306 463 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 AIFM1O95831 613 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 FAM58BPP0C7Q3 252 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 MC3RP41968 323 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 SMAD4Q13485 552 aaKnown RBP13.16□□□□□ -0.3
LSS-201ENST00000356396 MEP1AQ16819 746 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 TMEM236Q5W0B7 351 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 OR9Q2Q8NGE9 314 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 KLHDC7BQ96G42 594 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 OR2A14Q96R47 310 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 MAP3K3Q99759 626 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 ADI1Q9BV57 179 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 C1QTNF7Q9BXJ2 289 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 GLIPR2Q9H4G4 154 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 RIBC2Q9H4K1 309 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 HCN3Q9P1Z3 774 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
LSS-201ENST00000356396 CACNA1CQ13936 2221 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 FAM186AA6NE01 2351 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 XPNPEP2O43895 674 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 ERN1O75460 977 aaKnown RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 CD6P30203 668 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 LEXMQ3ZCV2 418 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 PTRH1Q86Y79 214 aaKnown RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 LACC1Q8IV20 430 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 CENPNQ96H22 339 aaPredicted RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 C19orf43Q9BQ61 176 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 YIPF2Q9BWQ6 316 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 TOR3AQ9H497 397 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 TBC1D17Q9HA65 648 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 ZCCHC3Q9NUD5 404 aaKnown RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 SLC9B1P1A6NJY1 282 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 AQP12BA6NM10 295 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 GCKP35557 465 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 GRIK2Q13002 908 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 FAM111BQ6SJ93 734 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 AQP12AQ8IXF9 295 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 NCSTNQ92542 709 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 TAMM41Q96BW9 452 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 HAUS8Q9BT25 410 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 DCAF13Q9NV06 445 aaKnown RBP13.15□□□□□ -0.3
LSS-201ENST00000356396 ACTR10Q9NZ32 417 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 MAGEL2Q9UJ55 1249 aa13.15□□□□□ -0.3
LSS-201ENST00000356396 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 CENPVL1A0A0U1RR11 272 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 TMEM229AB2RXF0 380 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 PATE3B3GLJ2 98 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 G3V2T6 193 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 HRKO00198 91 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 OCA2Q04671 838 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 SRSF11Q05519 484 aaKnown RBP13.14□□□□□ -0.31
LSS-201ENST00000356396 CDKL4Q5MAI5 379 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 LRIF1Q5T3J3 769 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 CYP4Z1Q86W10 505 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 OR8J2Q8NGG1 315 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 OR9A4Q8NGU2 314 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 RNF217Q8TC41 542 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
LSS-201ENST00000356396 BBS4Q96RK4 519 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 MYCBPQ99417 103 aaPredicted RBP13.14□□□□□ -0.31
LSS-201ENST00000356396 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
LSS-201ENST00000356396 KIR3DX1Q9H7L2 352 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 TAS2R9Q9NYW1 312 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 DSPP15924 2871 aaKnown RBP13.14□□□□□ -0.31
LSS-201ENST00000356396 SPTY2D1-AS1A0A0U1RR47 76 aa13.14□□□□□ -0.31
LSS-201ENST00000356396 M0R3H8 397 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms