RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SLC17A6Q9P2U8 582 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 FBXW11Q9UKB1 542 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 GSTT2P0CG29 244 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 TNFSF4P23510 183 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 SLC44A1Q8WWI5 657 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 FKRPQ9H9S5 495 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 NENFQ9UMX5 172 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 HAS3O00219 553 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 CSTAP01040 98 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 ART4Q93070 314 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 MUC13Q9H3R2 512 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 RP2O75695 350 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 FGL1Q08830 312 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 WFIKKN2Q8TEU8 576 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 PFDN5Q99471 154 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 FAM237AA0A1B0GTK4 181 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF99A8MXY4 864 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 GRID2O43424 1007 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 ESR1P03372 595 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 EPHA4P54764 986 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 DYRK1AQ13627 763 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 GAS6Q14393 721 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 RALGPS1Q5JS13 557 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 TMEM198Q66K66 360 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF517Q6ZMY9 492 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 C17orf50Q8WW18 174 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 LRFN5Q96NI6 719 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 C2orf42Q9NWW7 574 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 PCDHGA2Q9Y5H1 932 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 TRBC2A0A5B9 178 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 FTCDNL1E5RQL4 147 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 H7C1Q1 480 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 GPR25O00155 361 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF780AO75290 641 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 LPLP06858 475 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 PRKCAP17252 672 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 FXNQ16595 210 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 RNF130Q86XS8 419 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.63■□□□□ 0.252e-6■■■□□ 15.5
COL27A1-201ENST00000356083 RAB8BQ92930 207 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 RBM24Q9BX46 236 aaKnown RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 NDUFAF4Q9P032 175 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 SLC14A2Q15849 920 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 QPCTQ16769 361 aa16.63■□□□□ 0.25
COL27A1-201ENST00000356083 ZNF648Q5T619 568 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-201ENST00000356083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 ABCB7O75027 752 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 SIX3O95343 332 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 DUSP3P51452 185 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 ELOCQ15369 112 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 NSDHLQ15738 373 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 ABHD17BQ5VST6 288 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 TMIGD1Q6UXZ0 262 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 GALNT6Q8NCL4 622 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 ACDQ96AP0 544 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 H7BY64 318 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 RAP2AP10114 183 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 LRRC38Q5VT99 294 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 FAM83HQ6ZRV2 1179 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 PRAP1Q96NZ9 151 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 A0A1W2PP55 124 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 PLSCR5A0PG75 271 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 LCHNA4D1U4 455 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 OR5H15A6NDH6 313 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 OR5H14A6NHG9 310 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 OR5H1A6NKK0 313 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 SCELO95171 688 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 SLC2A5P22732 501 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 F2RP25116 425 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 PEX2P28328 305 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 FAM205BPQ63HN1 556 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 SHISA6Q6ZSJ9 500 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 FEZF1A0PJY2 475 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 PRPS1L1P21108 318 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 RCAN2Q14206 197 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 SIRPB2Q5JXA9 342 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 IRF7Q92985 503 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 PDZD7Q9H5P4 517 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 CXXC1Q9P0U4 656 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 CLCA1A8K7I4 914 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 SLAMF1Q13291 335 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 EEF1A1P5Q5VTE0 462 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 FRG2Q64ET8 278 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 OR4K14Q8NGD5 310 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 FRG2BQ96QU4 278 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 TMEM109Q9BVC6 243 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 MROQ9BYG7 248 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 ABRACLQ9P1F3 81 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 CLEC4EQ9ULY5 219 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 CA12O43570 354 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 MAS1P04201 325 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 PEPDP12955 493 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 HOXB6P17509 224 aaKnown RBP16.62■□□□□ 0.25
COL27A1-201ENST00000356083 LIMK2P53671 638 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 TMBIM6P55061 237 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 FAM110CQ1W6H9 321 aa16.62■□□□□ 0.25
COL27A1-201ENST00000356083 TRAM1L1Q8N609 369 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms