RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PHF11Q9UIL8 331 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 DAPP1Q9UN19 280 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 ASCC3Q8N3C0 2202 aaKnown RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 ZNF860A6NHJ4 632 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 TMEM150CB9EJG8 249 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 GSNP06396 782 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 ANKRD34CP0C6C1 535 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 MSL3P1P0C860 447 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 HOXB9P17482 250 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 BUD31P41223 144 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 LIM2P55344 173 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 SLC14A1Q13336 389 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 RUNX2Q13950 521 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 COL9A2Q14055 689 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 GTDC1Q4AE62 458 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 RUNDC3AQ59EK9 446 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 C6orf163Q5TEZ5 329 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 C1orf146Q5VVC0 180 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 GARNL3Q5VVW2 1013 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 C18orf63Q68DL7 685 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 NET1Q7Z628 596 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 PRSS33Q8NF86 280 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 EXOSC8Q96B26 276 aaKnown RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 C10orf90Q96M02 699 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 LYRM4Q9HD34 91 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 MS4A12Q9NXJ0 267 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 ERVK-11Q9UQG0 969 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 POMPQ9Y244 141 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 A0A1W2PRB8 838 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 HYKKA2RU49 373 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 FITM1A5D6W6 292 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 NVLO15381 856 aaKnown RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 PDPK1O15530 556 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 PRKRAO75569 313 aaKnown RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 NR2F6P10588 404 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 TCN1P20061 433 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 MTPNP58546 118 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 SKP1P63208 163 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 TNFRSF17Q02223 184 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 SPEM2Q0P670 501 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 FAM53BQ14153 422 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 GRM7Q14831 915 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 GPR19Q15760 415 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 CLPPQ16740 277 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 NIPAL1Q6NVV3 410 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 FAM180BQ6P0A1 224 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 ZNF621Q6ZSS3 439 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 ARHGAP22Q7Z5H3 698 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 OR4A15Q8NGL6 344 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 WDR60Q8WVS4 1066 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 UCN3Q969E3 161 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 GFM1Q96RP9 751 aaKnown RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 SH3GL1Q99961 368 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 EDEM2Q9BV94 578 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 SPRTNQ9H040 489 aaPredicted RBP14.76□□□□□ -0.05
CTSA-202ENST00000354880 ENAMQ9NRM1 1142 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 UTS2RQ9UKP6 389 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 PCDHGB4Q9UN71 923 aa14.76□□□□□ -0.05
CTSA-202ENST00000354880 CUL9Q8IWT3 2517 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 COL5A1P20908 1838 aaPredicted RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 IGHV5-10-1A0A0J9YXX1 117 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 GLOD5A6NK44 160 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 PGRMC2O15173 223 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 OR2B3O76000 313 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 C6orf47O95873 294 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 GP1BAP07359 652 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 FOLR1P15328 257 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 CPN2P22792 545 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 ACP1P24666 158 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 TLX1P31314 330 aaPredicted RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 MSX2P35548 267 aaPredicted RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 HBA1P69905 142 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 OLR1P78380 273 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 SELPLGQ14242 412 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 KPNB1Q14974 876 aaKnown RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 SPATS1Q496A3 300 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 SLC48A1Q6P1K1 146 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 CYB5D1Q6P9G0 228 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 TTC29Q8NA56 475 aaPredicted RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 FAM156AQ8NDB6 213 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 OR9A4Q8NGU2 314 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 GOT1L1Q8NHS2 421 aaPredicted RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 THUMPD3Q9BV44 507 aaKnown RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 NPLQ9BXD5 320 aaPredicted RBP14.75□□□□□ -0.05
CTSA-202ENST00000354880 ALG2Q9H553 416 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 RXFP3Q9NSD7 469 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 SEMA4GQ9NTN9 838 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 FTSJ1Q9UET6 329 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 CES1P1Q9UKY3 287 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 SPACA6W5XKT8 324 aa14.75□□□□□ -0.05
CTSA-202ENST00000354880 OTOGLQ3ZCN5 2332 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 H3BMH7 237 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 SGK494L7N484 410 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 NTN3O00634 580 aaPredicted RBP14.74□□□□□ -0.05
CTSA-202ENST00000354880 DNAJB6O75190 326 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 MED26O95402 600 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 ZCCHC18P0CG32 403 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 CD59P13987 128 aa14.74□□□□□ -0.05
CTSA-202ENST00000354880 HSD17B1P14061 328 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms