RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 NEK5Q6P3R8 708 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ZNF621Q6ZSS3 439 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 EIF3MQ7L2H7 374 aaKnown RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SLC7A5P1Q8MH63 180 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 FAM160A2Q8N612 972 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ASZ1Q8WWH4 475 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 TPD52L3Q96J77 140 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 HRASLS5Q96KN8 279 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 COPS4Q9BT78 406 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 C6orf62Q9GZU0 229 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 MMP27Q9H306 513 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 EPS8L2Q9H6S3 715 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 RPS6KA6Q9UK32 745 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SNX6Q9UNH7 406 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 RNF6Q9Y252 685 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ISPDA4D126 451 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 C10orf142B7Z368 130 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 YY2O15391 372 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 KCNK2O95069 426 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 NUDT7P0C024 238 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 AMD1P17707 334 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 PRPH2P23942 346 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 GADD45AP24522 165 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 GRK5P34947 590 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 SLC19A1P41440 591 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 WNT3P56703 355 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 RPS21P63220 83 aaKnown RBP8.21□□□□□ -1.09
TRIM55-204ENST00000353317 TUBA1BP68363 451 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 TCEA2Q15560 299 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 UGT8Q16880 541 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 DUOXA1Q1HG43 343 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 CCDC92Q53HC0 331 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-204ENST00000353317 SOWAHCQ53LP3 525 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-204ENST00000353317 ATAD3BQ5T9A4 648 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 NOXRED1Q6NXP6 359 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 TUBA1AQ71U36 451 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 GPR155Q7Z3F1 870 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 P3H2Q8IVL5 708 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 CLECL1Q8IZS7 167 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 POC5Q8NA72 575 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 FAM83FQ8NEG4 500 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-204ENST00000353317 RLN3Q8WXF3 142 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 NELL1Q92832 810 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 EFHD2Q96C19 240 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-204ENST00000353317 CMTM7Q96FZ5 175 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 C7orf34Q96L11 122 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 MIR1-1HGQ9H1L0 117 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 RNF167Q9H6Y7 350 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 LMAN1LQ9HAT1 526 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 SIAEQ9HAT2 523 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 TMEM184CQ9NVA4 438 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 QPCTLQ9NXS2 382 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 DUSP12Q9UNI6 340 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 ZNF451Q9Y4E5 1061 aa8.21□□□□□ -1.09
TRIM55-204ENST00000353317 NUP214P35658 2090 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-204ENST00000353317 MAGEB17A8MXT2 336 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 DSCR3O14972 297 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 PSIP1O75475 530 aaKnown RBP8.21□□□□□ -1.1
TRIM55-204ENST00000353317 EPN2O95208 641 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 C9P02748 559 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 CEACAM5P06731 702 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 MPC1LP0DKB6 136 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 GLULP15104 373 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 MAGP20916 626 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 UGT2B10P36537 528 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 PXNP49023 591 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-204ENST00000353317 TIGD6Q17RP2 521 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 PTCHD3Q3KNS1 767 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 GGTA1PQ4G0N0 100 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 CCDC103Q8IW40 242 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 FAM9CQ8IZT9 166 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 BMFQ96LC9 184 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 KCNC2Q96PR1 638 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 CDADC1Q9BWV3 514 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 EPHX3Q9H6B9 360 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 ANKHQ9HCJ1 492 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 SLC22A14Q9Y267 594 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 CFAP20Q9Y6A4 193 aaKnown RBP8.21□□□□□ -1.1
TRIM55-204ENST00000353317 LRP4O75096 1905 aa8.21□□□□□ -1.1
TRIM55-204ENST00000353317 PRAMEF33A0A0G2JMD5 474 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TMEM229AB2RXF0 380 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 DBTP11182 482 aaKnown RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SPNP16150 400 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 PRPS1L1P21108 318 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ACADLP28330 430 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 MAPK1P28482 360 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 GTF2E2P29084 291 aaKnown RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 AQP1P29972 269 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 RCVRNP35243 200 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SLC6A12P48065 614 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 TRPC1P48995 793 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 PFN3P60673 137 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 KCNJ10P78508 379 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ZP2Q05996 745 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SF3B4Q15427 424 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 SF1Q15637 639 aaKnown RBP8.2□□□□□ -1.1
TRIM55-204ENST00000353317 ZNF181Q2M3W8 571 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 FRG2Q64ET8 278 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 OR2L2Q8NH16 312 aa8.2□□□□□ -1.1
TRIM55-204ENST00000353317 MAL2Q969L2 176 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms