RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MRNIPQ6NTE8 343 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 USP30Q70CQ3 517 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 MIB1Q86YT6 1006 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 MDGA1Q8NFP4 955 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 CHTF18Q8WVB6 975 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 SARGQ9BW04 601 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 MND1Q9BWT6 205 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 POMT2Q9UKY4 750 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 TMEM5Q9Y2B1 443 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 ARL5AQ9Y689 179 aa12.68□□□□□ -0.38
IFT88-202ENST00000351808 MEIKINA0A087WXM9 373 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 G3V3Q6 166 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SLC28A1O00337 649 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 CASKO14936 926 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ADAMDEC1O15204 470 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 VTNP04004 478 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ENGP17813 658 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 AIF1P55008 147 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 IHHQ14623 411 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 FAM26DQ5JW98 314 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 METAP1DQ6UB28 335 aaPredicted RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 GOLGA7Q7Z5G4 137 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 BCDIN3DQ7Z5W3 292 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 NANOGP1Q8N7R0 232 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 OR13C4Q8NGS5 318 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 PIH1D2Q8WWB5 315 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 DUSP16Q9BY84 665 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ULBP1Q9BZM6 244 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 AGO3Q9H9G7 860 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 BEX1Q9HBH7 125 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ERAP1Q9NZ08 941 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SCP2D1Q9UJQ7 156 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SPIN1Q9Y657 262 aaPredicted RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 A0A1B0GVI7 797 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 AIPO00170 330 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 CLIC1O00299 241 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 PRRG1O14668 218 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 RGS14O43566 566 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 LRATO95237 230 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 TGM6O95932 706 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ADRB1P08588 477 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 PIRTP0C851 137 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 BCKDHAP12694 445 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ACLYP53396 1101 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SPIBQ01892 262 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 RBBP4Q09028 425 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SMAD2Q15796 467 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 NTRK2Q16620 822 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ARHGAP15Q53QZ3 475 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SFRP5Q5T4F7 317 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SERPINA11Q86U17 422 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 NSMAFQ92636 917 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 OR2M2Q96R28 347 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 MED9Q9NWA0 146 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 PURGQ9UJV8 347 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 RAI2Q9Y5P3 530 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 RNF215Q9Y6U7 377 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 A0A0G2JMZ2 1700 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 LRRC37A2A6NM11 1700 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 FAM170BA6NMN3 283 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SGCEO43556 437 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 TLR5O60602 858 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 HOXB9P17482 250 aaPredicted RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 BTF3P20290 206 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 BTCP35070 178 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 OR1E2P47887 323 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 RAB13P51153 203 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 CRYBA2P53672 197 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 ST3GAL2Q16842 350 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 KRT74Q7RTS7 529 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 CRYBG2Q8N1P7 616 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 TEX47Q8TBZ9 253 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 TSSK3Q96PN8 268 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 METTL17Q9H7H0 456 aaPredicted RBP12.67□□□□□ -0.38
IFT88-202ENST00000351808 EVA1AQ9H8M9 152 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 IPPKQ9H8X2 491 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 LRTM1Q9HBL6 345 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SLC25A19Q9HC21 320 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 NT5MQ9NPB1 228 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 C11orf16Q9NQ32 467 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 GSN-AS1Q9NRJ2 163 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 NDUFAF4Q9P032 175 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 NRXN2Q9P2S2 1712 aa12.67□□□□□ -0.38
IFT88-202ENST00000351808 SBF1O95248 1867 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 PQLC2LA1A4F0 135 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 ZBTB42B2RXF5 422 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 SUV39H1O43463 412 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 SSNA1O43805 119 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 TFPIP10646 304 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 HOXB8P17481 243 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms