RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SLAMF7Q9NQ25 335 aa21.09■□□□□ 0.97
UPF3A-201ENST00000351487 FUOMA2VDF0 154 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 EFCAB9A8MZ26 197 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 CAPN5O15484 640 aaPredicted RBP21.08■□□□□ 0.97
UPF3A-201ENST00000351487 CCNB2O95067 398 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 IFNW1P05000 195 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 LIPAP38571 399 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 REEP5Q00765 189 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 FAM78AQ5JUQ0 283 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 TMEM240Q5SV17 173 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 NIPAL1Q6NVV3 410 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 PNCKQ6P2M8 343 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 CEACAM20Q6UY09 585 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 PAGE2Q7Z2X7 111 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 TM4SF18Q96CE8 201 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 ZNF764Q96H86 408 aaPredicted RBP21.08■□□□□ 0.97
UPF3A-201ENST00000351487 PCBD2Q9H0N5 130 aa21.08■□□□□ 0.97
UPF3A-201ENST00000351487 M0R082 166 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 PCDH17O14917 1159 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 CDK3Q00526 305 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 NUMA1Q14980 2115 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 METRNLQ641Q3 311 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 ASB16Q96NS5 453 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 MAPKAP1Q9BPZ7 522 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 MROQ9BYG7 248 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 PITHD1Q9GZP4 211 aaPredicted RBP21.08■□□□□ 0.96
UPF3A-201ENST00000351487 CUEDC1Q9NWM3 386 aaPredicted RBP21.08■□□□□ 0.96
UPF3A-201ENST00000351487 LMCD1Q9NZU5 365 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 SELENONQ9NZV5 590 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 SNX8Q9Y5X2 465 aa21.08■□□□□ 0.96
UPF3A-201ENST00000351487 PDPK1O15530 556 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 DDX5P17844 614 aaKnown RBP21.07■□□□□ 0.96
UPF3A-201ENST00000351487 FRKP42685 505 aaPredicted RBP21.07■□□□□ 0.96
UPF3A-201ENST00000351487 FPGSQ05932 587 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 HEPACAMQ14CZ8 416 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 DUSP7Q16829 419 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 TMEM236Q5W0B7 351 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 ALPK1Q96QP1 1244 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 NT5DC2Q9H857 520 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 DNMT3AQ9Y6K1 912 aaPredicted RBP21.07■□□□□ 0.96
UPF3A-201ENST00000351487 C2orf16Q68DN1 1984 aa21.07■□□□□ 0.96
UPF3A-201ENST00000351487 KPNA4O00629 521 aaPredicted RBP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 BMP4P12644 408 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 UGT2B10P36537 528 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 GSTM5P46439 218 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 BCAP31P51572 246 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 CCR8P51685 355 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 CNTN1Q12860 1018 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 OXA1LQ15070 435 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 PIP5KL1Q5T9C9 394 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 HORMAD2Q8N7B1 307 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 UTP15Q8TED0 518 aaKnown RBP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 SUSD6Q92537 303 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 ZHX1-C8orf76Q96EF9 292 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 F2RL3Q96RI0 385 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 TRPM6Q9BX84 2022 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 HEATR5BQ9P2D3 2071 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 RTCAO00442 366 aaKnown RBP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 IL12RB1P42701 662 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 PCBP4P57723 403 aaKnown RBP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 TUBA1BP68363 451 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 CYP4F2P78329 520 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 PUM1Q14671 1186 aaKnown RBP eCLIP21.06■□□□□ 0.963e-6■■□□□ 11.4
UPF3A-201ENST00000351487 GANABQ14697 944 aaKnown RBP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 SYT16Q17RD7 645 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 TIGD6Q17RP2 521 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 ZNF770Q6IQ21 691 aaPredicted RBP21.06■□□□□ 0.96
UPF3A-201ENST00000351487 TUBA1AQ71U36 451 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 PLD3Q8IV08 490 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 SLC38A5Q8WUX1 472 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 SMPDL3AQ92484 453 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 COL21A1Q96P44 957 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 QRFPRQ96P65 431 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 AMBNQ9NP70 447 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 IMPAD1Q9NX62 359 aa21.06■□□□□ 0.96
UPF3A-201ENST00000351487 FUT4P22083 530 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 MANFP55145 182 aaKnown RBP21.05■□□□□ 0.96
UPF3A-201ENST00000351487 FBXO43Q4G163 708 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 EGFLAMQ63HQ2 1017 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 FAM180BQ6P0A1 224 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 AQP11Q8NBQ7 271 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 PHOSPHO2Q8TCD6 241 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 BADQ92934 168 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 LHX9Q9NQ69 397 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 PRSS16Q9NQE7 514 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 GPR83Q9NYM4 423 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 FTSJ1Q9UET6 329 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 A0A1W2PPV9 198 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 ZAR1LA6NP61 321 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 AIREO43918 545 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 PCCBP05166 539 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 BCHEP06276 602 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 CTSKP43235 329 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 NUDT6P53370 316 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 IRF3Q14653 427 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 PTGES3Q15185 160 aaKnown RBP21.05■□□□□ 0.96
UPF3A-201ENST00000351487 INAQ16352 499 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 COLEC12Q5KU26 742 aa21.05■□□□□ 0.96
UPF3A-201ENST00000351487 SLC46A3Q7Z3Q1 461 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 378.2 ms