RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 C9orf43Q8TAL5 461 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 C16orf78Q8WTQ4 265 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 COL21A1Q96P44 957 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PKP2Q99959 881 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 EVA1AQ9H8M9 152 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PDE7BQ9NP56 450 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 ASIC5Q9NY37 505 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 C19orf25Q9UFG5 118 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 PPIL1Q9Y3C6 166 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 U3KQV3 271 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 H0YAE9 185 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 hCG_2039718K7EN88 272 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 H6PDO95479 791 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 H1F0P07305 194 aaKnown RBP11.65□□□□□ -0.54
SMAD9-201ENST00000350148 IL12BP29460 328 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 GMPRP36959 345 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 TALDO1P37837 337 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 TDGQ13569 410 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 QPRTQ15274 297 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 FAM220AQ7Z4H9 259 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 FBXO27Q8NI29 283 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 C17orf62Q9BQA9 187 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 ADAMTS6Q9UKP5 1117 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 TESMINQ9Y4I5 508 aa11.65□□□□□ -0.54
SMAD9-201ENST00000350148 SCN1AP35498 2009 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 RNASET2O00584 256 aaKnown RBP11.65□□□□□ -0.55
SMAD9-201ENST00000350148 HMGN1P05114 100 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 T-ENOLP0DO92 83 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 CD6P30203 668 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 PGGT1BP53609 377 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 CEACAM7Q14002 265 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 CYBRD1Q53TN4 286 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 TMBIM1Q969X1 311 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 ANKMY1Q9P2S6 941 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 INTS6Q9UL03 887 aaKnown RBP11.65□□□□□ -0.55
SMAD9-201ENST00000350148 CA14Q9ULX7 337 aa11.65□□□□□ -0.55
SMAD9-201ENST00000350148 LAMTOR5O43504 91 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 FUT4P22083 530 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 MAGEA2P43356 314 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 GSSP48637 474 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 NRG3P56975 720 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM214Q6NUQ4 689 aaKnown RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 LSMEM2Q8N112 164 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 ANKFN1Q8N957 763 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 OR52N2Q8NGI0 321 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 OR2L8Q8NGY9 312 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 OR5K2Q8NHB8 316 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 NFKBIDQ8NI38 313 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 WBP2Q969T9 261 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 MAELQ96JY0 434 aaKnown RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM74Q96NL1 305 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 EPB41L1Q9H4G0 881 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 XKR8Q9H6D3 395 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TNFRSF10CO14798 259 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 GPR37L1O60883 481 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TRMUO75648 421 aaKnown RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 GGT1P19440 569 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 FIGLAQ6QHK4 219 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 RTL4Q6ZR62 310 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 LRRC17Q8N6Y2 441 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 OR8H1Q8NGG4 311 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 HSH2DQ96JZ2 352 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 GPR78Q96P69 363 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 IL17FQ96PD4 163 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 UHRF1Q96T88 793 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 CNPPD1Q9BV87 410 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 VN1R3Q9BXE9 311 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 ADAP2Q9NPF8 381 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM181Q9P2C4 612 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TSPAN11A1L157 253 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 PRSS38A1L453 326 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 C9J4A7 227 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 EI24O14681 340 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 CFIP05156 583 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 RETP07949 1114 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 MYOGP15173 224 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 AHRP35869 848 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 TPTEP56180 551 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 SMAD4Q13485 552 aaKnown RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 MZT2AQ6P582 158 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 COMMD6Q7Z4G1 85 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 SERINC2Q96SA4 455 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 POT1Q9NUX5 634 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 PCDHGA10Q9Y5H3 936 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 SBF1O95248 1867 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 M0QX08 132 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 RNH1P13489 461 aaKnown RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 RAB25P57735 213 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 RAB8AP61006 207 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 ST3GAL3Q11203 375 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 SBSNQ6UWP8 590 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 KLHDC8BQ8IXV7 354 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 ZDHHC1Q8WTX9 485 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 PIGUQ9H490 435 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 FARSBQ9NSD9 589 aaKnown RBP11.64□□□□□ -0.55
SMAD9-201ENST00000350148 EHD3Q9NZN3 535 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 NUP50Q9UKX7 468 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms