RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 RASGRP1O95267 797 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ALDOBP05062 364 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HIST1H2AGP0C0S8 130 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 GABRB1P18505 474 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HIST1H2ADP20671 130 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ATP5A1P25705 553 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PTGFRP43088 359 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 DGKEP52429 567 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 LGALS3BPQ08380 585 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PLA1AQ53H76 456 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ACER2Q5QJU3 275 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HIST2H2AA3Q6FI13 130 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 FAHD1Q6P587 224 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HAGHLQ6PII5 290 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 DDX53Q86TM3 631 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 CIR1Q86X95 450 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 KRT78Q8N1N4 520 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 L3MBTL4Q8NA19 623 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 IL17RCQ8NAC3 791 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HIST1H2AHQ96KK5 128 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 TMEM68Q96MH6 324 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HIST1H2AJQ99878 128 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 KCNH6Q9H252 994 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ATXN3LQ9H3M9 355 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 C8orf33Q9H7E9 229 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 TMEM184CQ9NVA4 438 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MED9Q9NWA0 146 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 TXNL4BQ9NX01 149 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ABT1Q9ULW3 272 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SSR3Q9UNL2 185 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 TEX13CA0A0J9YWL9 993 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 C7orf66A4D0T2 115 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 OR6C75A6NL08 312 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 WRBO00258 174 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 GPR31O00270 319 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 CCL22O00626 93 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 VPS4BO75351 444 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 POP4O95707 220 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MT-CYBP00156 380 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PRF1P14222 555 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 CTPS1P17812 591 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 RFC3P40938 356 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SLC6A3Q01959 620 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 DUSP4Q13115 394 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SNTB1Q13884 538 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 PTGR1Q14914 329 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 EIF4HQ15056 248 aaKnown RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SURF1Q15526 300 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HECTD3Q5T447 861 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 LDLRAD1Q5T700 205 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 FAM198BQ6UWH4 519 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 WASH2PQ6VEQ5 465 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MCPH1Q8NEM0 835 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 OR52P1PQ8NH57 321 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 OR1S1Q8NH92 325 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 FBXO17Q96EF6 278 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 NT5DC2Q9H857 520 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 LATS2Q9NRM7 1088 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 SEC14L3Q9UDX4 400 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF225Q9UK10 706 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 RPS6KA6Q9UK32 745 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 HCN2Q9UL51 889 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 DUSP12Q9UNI6 340 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 POLR3HQ9Y535 204 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-203ENST00000349748 IRAK3Q9Y616 596 aa10.2□□□□□ -0.78
CAPN3-203ENST00000349748 MEIKINA0A087WXM9 373 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 NCF1BA6NI72 391 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 ERI2A8K979 691 aaKnown RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 NCF1CA8MVU1 366 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 D6RAR5 112 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 SSNA1O43805 119 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 C1QCP02747 245 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 MTHFD2P13995 350 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 NCF1P14598 390 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 ITGB7P26010 798 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 ACSL1P33121 698 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 CHRNA4P43681 627 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 FNTBP49356 437 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF157P51786 506 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 RIDAP52758 137 aaKnown RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 ZP1P60852 638 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 LCP2Q13094 533 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 TAF1AQ15573 450 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 FAM174BQ3ZCQ3 159 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF667Q5HYK9 610 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 CD276Q5ZPR3 534 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 PAQR6Q6TCH4 344 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 MAMDC2Q7Z304 686 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 HSD17B13Q7Z5P4 300 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-203ENST00000349748 MDGA1Q8NFP4 955 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 GLYATL2Q8WU03 294 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 RNF139Q8WU17 664 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 NR4A3Q92570 626 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 C12orf42Q96LP6 360 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 CDK15Q96Q40 435 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 NTMT1Q9BV86 223 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 CDCA4Q9BXL8 241 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 REEP1Q9H902 201 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 RLIMQ9NVW2 624 aa10.19□□□□□ -0.78
CAPN3-203ENST00000349748 C1orf109Q9NX04 203 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms