RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 METTL25Q8N6Q8 603 aa16.32■□□□□ 0.2
SMARCC2-202ENST00000347471 RAB11FIP5Q9BXF6 653 aa16.32■□□□□ 0.2
SMARCC2-202ENST00000347471 SYNPO2LQ9H987 977 aa16.32■□□□□ 0.2
SMARCC2-202ENST00000347471 CKAP5Q14008 2032 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 H3BSA7 217 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 MBTPS2O43462 519 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 NDUFS2O75306 463 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 ALPLP05186 524 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 OR12D1P0DN82 309 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 NR2F1P10589 423 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 IL1RNP18510 177 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 PPIBP23284 216 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 SHMT2P34897 504 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 C6orf120Q7Z4R8 191 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 PAPD5Q8NDF8 572 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 FCRL1Q96LA6 429 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 SPAG17Q6Q759 2223 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 TMEM247A6NEH6 219 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 GSTT1P30711 240 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 NTSP30990 170 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 CCINQ13939 588 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 FGD3Q5JSP0 725 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 C8orf59Q8N0T1 100 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 HORMAD2Q8N7B1 307 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 PACRGLQ8N7B6 248 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 OR5K1Q8NHB7 308 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 SGCDQ92629 289 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 ZBED6CLQ96FA7 236 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 CCDC3Q9BQI4 270 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 THUMPD1Q9NXG2 353 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 MAPRE3Q9UPY8 281 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 C4orf51C9J302 202 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 TNFP01375 233 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 RAD23AP54725 363 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 SIM1P81133 766 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 TXNL4AP83876 142 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 SLC36A3Q495N2 470 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 TMEM107Q6UX40 140 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 DEF8Q6ZN54 512 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 RNF217Q8TC41 542 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 RBM4BQ9BQ04 359 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 RBM4Q9BWF3 364 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 FAIM2Q9BWQ8 316 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 MRPS26Q9BYN8 205 aaKnown RBP16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 IL21RQ9HBE5 538 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 WASH6PQ9NQA3 447 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 C3orf18Q9UK00 162 aa16.31■□□□□ 0.2
SMARCC2-202ENST00000347471 C1orf226A1L170 272 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 KLHL18O94889 574 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 PTNP21246 168 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 FBXO43Q4G163 708 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 Q6ZPB1 254 aaPredicted RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 MSANTD1Q6ZTZ1 278 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 UBE3DQ7Z6J8 389 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 OR52N2Q8NGI0 321 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 POLR1BQ9H9Y6 1135 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 AMBNQ9NP70 447 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 KLF15Q9UIH9 416 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 CORO2BQ9UQ03 480 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 LAMA1P25391 3075 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 COL6A3P12111 3177 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 H3BNH8 94 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 ZNF888P0CJ79 500 aaPredicted RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 CNPY1Q3B7I2 92 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 ARMC6Q6NXE6 501 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 SHISA5Q8N114 240 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 UTP15Q8TED0 518 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 COL21A1Q96P44 957 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 LHX9Q9NQ69 397 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 HEBP2Q9Y5Z4 205 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 EIF3MQ7L2H7 374 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 MFSD2AQ8NA29 543 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 GTPBP3Q969Y2 492 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 FBRSQ9HAH7 460 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 KRT84Q9NSB2 600 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 WARS2Q9UGM6 360 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 APOBEC3BQ9UH17 382 aaKnown RBP16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 ANGPT4Q9Y264 503 aa16.3■□□□□ 0.2
SMARCC2-202ENST00000347471 FAM170BA6NMN3 283 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 SLC35G6P0C7Q6 338 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 JUNDP17535 347 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 HIST1H1TP22492 207 aaPredicted RBP16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 NR4A1P22736 598 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 IDH2P48735 452 aaKnown RBP16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 ESRRGP62508 458 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 DMPKQ09013 629 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 GPAT3Q53EU6 434 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 CCDC81Q6ZN84 652 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 CNIH3Q8TBE1 160 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 SLC37A2Q8TED4 501 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 KLHDC7BQ96G42 594 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 ZNF717Q9BY31 904 aaPredicted RBP16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 IL1RAPQ9NPH3 570 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 SNRNP200O75643 2136 aaKnown RBP16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 SERTM1A2A2V5 107 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 ZBTB11O95625 1053 aaPredicted RBP16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 AGXTP21549 392 aa16.29■□□□□ 0.2
SMARCC2-202ENST00000347471 SNRPNP63162 240 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms