RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MIEF1Q9NQG6 463 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 PRDM9Q9NQV7 894 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 ACSS1Q9NUB1 689 aaPredicted RBP10.4□□□□□ -0.75
ECM1-201ENST00000346569 TAS2R9Q9NYW1 312 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 PDP2Q9P2J9 529 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 STX18Q9P2W9 335 aaKnown RBP10.4□□□□□ -0.75
ECM1-201ENST00000346569 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.4□□□□□ -0.75
ECM1-201ENST00000346569 FBXW2Q9UKT8 454 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 DAPP1Q9UN19 280 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 PLCL2Q9UPR0 1127 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 PCDHB3Q9Y5E6 796 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 PCDHGA5Q9Y5G8 931 aa10.4□□□□□ -0.75
ECM1-201ENST00000346569 ASXL3Q9C0F0 2248 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 MN1Q10571 1320 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 H3BMH7 237 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 CASC3O15234 703 aaKnown RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 DUX1O43812 170 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 GALR3O60755 368 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 ANP32DO95626 131 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 AIFM1O95831 613 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 C6orf47O95873 294 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 C8BP07358 591 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 ABCB1P08183 1280 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 ENGP17813 658 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 DDX5P17844 614 aaKnown RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 GCKP35557 465 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 ERFP50548 548 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 MVDP53602 400 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 LIM2P55344 173 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 RHDQ02161 417 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 ABHD18Q0P651 414 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 SLC14A1Q13336 389 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 NR0B2Q15466 257 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 CEBPEQ15744 281 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 SNCBQ16143 134 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 LPAL2Q16609 132 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 DEFB134Q4QY38 66 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 PLA2G2CQ5R387 149 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 PERM1Q5SV97 790 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 C18orf63Q68DL7 685 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 LCN8Q6JVE9 175 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 SLC48A1Q6P1K1 146 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 GUSBP11Q6P575 273 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 TMEM71Q6P5X7 295 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 DNAJC14Q6Y2X3 702 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 RNF111Q6ZNA4 994 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 IFNEQ86WN2 208 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 DHFR2Q86XF0 187 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 PDSS2Q86YH6 399 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 Q8N9G6 341 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 GOLM1Q8NBJ4 401 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 OR4A15Q8NGL6 344 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 CCDC74AQ96AQ1 378 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 SLC41A2Q96JW4 573 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 KCTD14Q9BQ13 255 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 PIF1Q9H611 641 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 COPS7BQ9H9Q2 264 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 TPT1P8Q9HAU6 139 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 LYRM4Q9HD34 91 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 SLC35C2Q9NQQ7 365 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 GPATCH2Q9NW75 528 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 C5AR2Q9P296 337 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 ZNF282Q9UDV7 671 aaPredicted RBP10.39□□□□□ -0.75
ECM1-201ENST00000346569 EGFL7Q9UHF1 273 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 PCDHGB4Q9UN71 923 aa10.39□□□□□ -0.75
ECM1-201ENST00000346569 FITM1A5D6W6 292 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 AQP12BA6NM10 295 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 EVPLLA8MZ36 301 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 MYO1GB0I1T2 1018 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 H3BNX3 289 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 ARPC2O15144 300 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 PDPK1O15530 556 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 FOXS1O43638 330 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 B3GALT2O43825 422 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 MED26O95402 600 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 MSL3P1P0C860 447 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 ZNF883P0CG24 379 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 ZNF10P21506 573 aaPredicted RBP10.38□□□□□ -0.75
ECM1-201ENST00000346569 PPIBP23284 216 aaKnown RBP10.38□□□□□ -0.75
ECM1-201ENST00000346569 CSF2RBP32927 897 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 MPLP40238 635 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 ALDH9A1P49189 494 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 EMP3P54852 163 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 MANFP55145 182 aaKnown RBP10.38□□□□□ -0.75
ECM1-201ENST00000346569 FAM53BQ14153 422 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 DEFB110Q30KQ9 67 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 INAVAQ3KP66 663 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 AMZ1Q400G9 498 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 GARNL3Q5VVW2 1013 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 CPZQ66K79 652 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 GLYATQ6IB77 296 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 FAM180BQ6P0A1 224 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 ZNF574Q6ZN55 896 aaPredicted RBP10.38□□□□□ -0.75
ECM1-201ENST00000346569 PRSS41Q7RTY9 318 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 PRSS42Q7Z5A4 293 aa10.38□□□□□ -0.75
ECM1-201ENST00000346569 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms