RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 OR56B4Q8NH76 319 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 CDKN2AIPNLQ96HQ2 116 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SLC6A17Q9H1V8 727 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 AIG1Q9NVV5 245 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZIM2Q9NZV7 527 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ENPP5Q9UJA9 477 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 COPS3Q9UNS2 423 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OTOL1A6NHN0 477 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 SMLR1H3BR10 107 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 STK16O75716 305 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SUPT20HL2P0C7V6 817 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 HABP2Q14520 560 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 GLB1LQ6UWU2 654 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OMDQ99983 421 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 TREHO43280 583 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SLC22A5O76082 557 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 HLA-AP01891 365 aaKnown RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 AKR1C4P17516 323 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 RAB6AP20340 208 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SCAPQ12770 1279 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MAP1SQ66K74 1059 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZNF585AQ6P3V2 769 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 TTLL10Q6ZVT0 673 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ITIH5Q86UX2 942 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 IFNLR1Q8IU57 520 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 DNAJC22Q8N4W6 341 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZNF454Q8N9F8 522 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 TXNDC5Q8NBS9 432 aaKnown RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 PXT1Q8NFP0 134 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SPOCK2Q92563 424 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 WRAP53Q9BUR4 548 aaKnown RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 SUCNR1Q9BXA5 334 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MFFQ9GZY8 342 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 POPDC2Q9HBU9 364 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SNX10Q9Y5X0 201 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 RNF215Q9Y6U7 377 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ELOA3DA6NLF2 546 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZNF670-ZNF695F2Z2N8 137 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 H0Y8G0 127 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 HTRA2O43464 458 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 C22orf31O95567 290 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SERPINA7P05543 415 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MC3RP41968 323 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 AVPR1BP47901 424 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 PNLIPRP1P54315 467 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MTPNP58546 118 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MEF2DQ14814 521 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 PROX2Q3B8N5 592 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ELOA3BQ3SY89 546 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 FAM122BQ7Z309 247 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 GALNT13Q8IUC8 556 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 LGI4Q8N135 537 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ELOA3Q8NG57 546 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 C22orf15Q8WYQ4 148 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 CHFRQ96EP1 664 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZDHHC15Q96MV8 337 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OR52B2Q96RD2 323 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ULBP1Q9BZM6 244 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 UGT2A1Q9Y4X1 527 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 LMTK3Q96Q04 1460 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OVOS2A0A0J9YW53 1432 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OVOS2Q6IE36 1432 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 AGPAT2O15120 278 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MRPS14O60783 128 aaKnown RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 XYLBO75191 536 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MATN4O95460 622 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ALDOBP05062 364 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZNF41P51814 821 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 ERVK-21P61565 698 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SLC6A3Q01959 620 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 GPR19Q15760 415 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 LYRM7Q5U5X0 104 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 C22orf42Q6IC83 251 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 FSTL4Q6MZW2 842 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 MFSD6LQ8IWD5 586 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OR7G3Q8NG95 312 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 EXOSC8Q96B26 276 aaKnown RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 ZNF512BQ96KM6 892 aaPredicted RBP5.96□□□□□ -1.46
VCAN-203ENST00000343200 CIPCQ9C0C6 399 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 PCBD2Q9H0N5 130 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 PCED1AQ9H1Q7 454 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 OR12D3Q9UGF7 316 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 PRELID3BQ9Y3B1 194 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 SNCAIPQ9Y6H5 919 aa5.96□□□□□ -1.46
VCAN-203ENST00000343200 KIAA1324LA8MWY0 1029 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 RCBTB2O95199 551 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PCDH8O95206 1070 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 NSA2O95478 260 aaKnown RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 LRG1P02750 347 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 GCP02774 474 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 A1BGP04217 495 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 TYRP14679 529 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 GIPRP48546 466 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 PMS2P3Q13401 168 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 MGAT5BQ3V5L5 792 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 CAPN13Q6MZZ7 669 aaPredicted RBP5.95□□□□□ -1.46
VCAN-203ENST00000343200 LARP4Q71RC2 724 aaKnown RBP eCLIP5.95□□□□□ -1.46
VCAN-203ENST00000343200 SYT14Q8NB59 555 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 SLC43A3Q8NBI5 491 aa5.95□□□□□ -1.46
VCAN-203ENST00000343200 RBPMSQ93062 196 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms