RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MEDAGQ5VYS4 303 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 LIN54Q6MZP7 749 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SLC27A4Q6P1M0 643 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PRSS58Q8IYP2 241 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 OR4K5Q8NGD3 323 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SETD7Q8WTS6 366 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 FATE1Q969F0 183 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 TRNT1Q96Q11 434 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF300Q96RE9 604 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 PHOX2BQ99453 314 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 BTBD1Q9H0C5 482 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 DSN1Q9H410 356 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ACSL5Q9ULC5 683 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 FAAHO00519 579 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 KIAA0513O60268 411 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 KHDRBS3O75525 346 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 SLITRK5O94991 958 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 RCBTB2O95199 551 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 IGLV3-25P01717 112 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ITIH1P19827 911 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ALAS2P22557 587 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CLCN7P51798 805 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 FPGSQ05932 587 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SLC35F1Q5T1Q4 408 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 LIPKQ5VXJ0 399 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CPZQ66K79 652 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CCBE1Q6UXH8 406 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF517Q6ZMY9 492 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 DENND6BQ8NEG7 585 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 LKAAEAR1Q8TD35 194 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 BHLHE41Q9C0J9 482 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 CLMPQ9H6B4 373 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 C14orf119Q9NWQ9 140 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 INTS6Q9UL03 887 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 HEMK1Q9Y5R4 338 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 MAST2Q6P0Q8 1798 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 MCIDASD6RGH6 385 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PTNP21246 168 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CNR2P34972 360 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PPP5CP53041 499 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 WSCD2Q2TBF2 565 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PRPF38BQ5VTL8 546 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 HSD11B1LQ7Z5J1 315 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 GPR149Q86SP6 731 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CAMKVQ8NCB2 501 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 NCSTNQ92542 709 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 TEX37Q96LM6 180 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 RIPOR3Q96MK2 946 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SLC46A2Q9BY10 475 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 TNFRSF12AQ9NP84 129 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PAK6Q9NQU5 681 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 C5AR2Q9P296 337 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 TARM1B6A8C7 271 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 UGDHO60701 494 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF821O75541 412 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 ADAP00813 363 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ACADLP28330 430 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PCSK6P29122 969 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CSTF1Q05048 431 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 GRM2Q14416 872 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF776Q68DI1 518 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 GRHL2Q6ISB3 625 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 FAM43BQ6ZT52 329 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF367Q7RTV3 350 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SERPINA11Q86U17 422 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 RTN4RL1Q86UN2 441 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 JAZF1Q86VZ6 243 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 NEIL2Q969S2 332 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 DPH7Q9BTV6 452 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 MARF1Q9Y4F3 1742 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 FAM172BPA6NC97 362 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 VILLO15195 856 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 VEGFDO43915 354 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GPR37L1O60883 481 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 CTSAP10619 480 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 IFI30P13284 250 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GADD45AP24522 165 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 ID2Q02363 134 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 EMX1Q04741 257 aaPredicted RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 MAD2L1BPQ15013 274 aaPredicted RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 CST9Q5W186 159 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 SLC30A6Q6NXT4 461 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 TMEM173Q86WV6 379 aaPredicted RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.88□□□□□ -1.31
VCAN-202ENST00000342785 OR8H1Q8NGG4 311 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 MOSPD2Q8NHP6 518 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 C16orf78Q8WTQ4 265 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GAL3ST4Q96RP7 486 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 C11orf49Q9H6J7 331 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 BCORQ6W2J9 1755 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 FUOMA2VDF0 154 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 XKRYO14609 159 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 AP1G1O43747 822 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 C1QAP02745 245 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 AOAHP28039 575 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 GRK6P43250 576 aa6.88□□□□□ -1.31
VCAN-202ENST00000342785 SELENOWP63302 87 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms