RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 DUSP7Q16829 419 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 PYDC2Q56P42 97 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 PDZK1Q5T2W1 519 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 ANXA8L1Q5VT79 327 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 LAS2Q8IYD9 372 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 FAM46DQ8NEK8 389 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 HUS1BQ8NHY5 278 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 C11orf24Q96F05 449 aaPredicted RBP21.36■■□□□ 1.01
TRIM28-202ENST00000341753 RETREG1Q9H6L5 497 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 THSD1Q9NS62 852 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 A0A0X1KG70 313 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 H3BN98 237 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 APOL3O95236 402 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 GJA1P17302 382 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 CHI3L1P36222 383 aaPredicted RBP21.36■■□□□ 1.01
TRIM28-202ENST00000341753 CAV3P56539 151 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 SNRPD2P62316 118 aaKnown RBP21.36■■□□□ 1.01
TRIM28-202ENST00000341753 CYP4F8P98187 520 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 PTSQ03393 145 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 SLC5A12Q1EHB4 618 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 RPS26P11Q5JNZ5 115 aaPredicted RBP21.36■■□□□ 1.01
TRIM28-202ENST00000341753 GEMIN6Q8WXD5 167 aaKnown RBP21.36■■□□□ 1.01
TRIM28-202ENST00000341753 DEFB118Q96PH6 123 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 OR4K3Q96R72 315 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 STUB1Q9UNE7 303 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 CCDC88CQ9P219 2028 aa21.36■■□□□ 1.01
TRIM28-202ENST00000341753 OR2AG2A6NM03 316 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 FADS2P1A8MWK0 482 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 HOXA2O43364 376 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 TSPAN19P0C672 248 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 LIMS1P48059 325 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 LIPJQ5W064 366 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 REM2Q8IYK8 340 aaPredicted RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 BRD9Q9H8M2 597 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 TMEM39AQ9NV64 488 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 ALPK3Q96L96 1907 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SMLR1H3BR10 107 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 GFYI3L273 518 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 KPNA5O15131 536 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 POLR2EP19388 210 aaKnown RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 PTX3P26022 381 aaPredicted RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 STK19P49842 368 aaPredicted RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 GLYR1Q49A26 553 aaPredicted RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 CEP78Q5JTW2 689 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 LILRA3Q8N6C8 439 aaPredicted RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 IQCF1Q8N6M8 205 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 KLHL6Q8WZ60 621 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SLC6A18Q96N87 628 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 FRMD6Q96NE9 622 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SLC25A19Q9HC21 320 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SEC14L4Q9UDX3 406 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SSR3Q9UNL2 185 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SCN8AQ9UQD0 1980 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 AGAP14A8MT82 685 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 FFAR1O14842 300 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 RECKO95980 971 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 CCNYL3P0C7X3 344 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 ZNF8P17098 575 aaPredicted RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 GPC1P35052 558 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 RPS5P46782 204 aaKnown RBP21.35■■□□□ 1.01
TRIM28-202ENST00000341753 RHAGQ02094 409 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 LRRC74AQ0VAA2 488 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 VWA5B2Q8N398 1253 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 SYT14Q8NB59 555 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 CLIP3Q96DZ5 547 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 TMEM80Q96HE8 168 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 RNF121Q9H920 327 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 ENPP4Q9Y6X5 453 aa21.35■■□□□ 1.01
TRIM28-202ENST00000341753 C5orf42Q9H799 3197 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 ARHGEF33A8MVX0 844 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 ABLIM3O94929 683 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 ASMTP46597 345 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 LIM2P55344 173 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 RPS26P62854 115 aaKnown RBP21.34■■□□□ 1.01
TRIM28-202ENST00000341753 ASAH1Q13510 395 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 EFR3AQ14156 821 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 SEC23BQ15437 767 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 DEFB115Q30KQ5 88 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 SAXO2Q658L1 398 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 TCEANCQ8N8B7 351 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 YIPF7Q8N8F6 280 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 OR7G3Q8NG95 312 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 SMG9Q9H0W8 520 aaKnown RBP21.34■■□□□ 1.01
TRIM28-202ENST00000341753 C1GALT1Q9NS00 363 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 ACOXLQ9NUZ1 547 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 BACE2Q9Y5Z0 518 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 TRAV19A0A0A6YYK7 116 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 HYKKA2RU49 373 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 PLA2G10O15496 165 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 AKR7A2O43488 359 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 TPST2O60704 377 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 EFEMP2O95967 443 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 BDKRB1P46663 353 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 ZNF91Q05481 1191 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.34■■□□□ 1.01
TRIM28-202ENST00000341753 MPEG1Q2M385 716 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 CCDC149Q6ZUS6 474 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 PHC2Q8IXK0 858 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 MMP21Q8N119 569 aa21.34■■□□□ 1.01
TRIM28-202ENST00000341753 DCAF4L2Q8NA75 395 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms