RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SYN2Q92777 582 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 ADAD1Q96M93 576 aaKnown RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 TM9SF2Q99805 663 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 ELOVL5Q9NYP7 299 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 POLR3KQ9Y2Y1 108 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 SLC6A5Q9Y345 797 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 RNF115Q9Y4L5 304 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 TCRBV5S1A1TA0A578 114 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 LRRD1A4D1F6 860 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 SIGLEC16A6NMB1 481 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 NSA2O95478 260 aaKnown RBP10.02□□□□□ -0.81
ATXN3-201ENST00000340660 RAC2P15153 192 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 NR4A2P43354 598 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 CLCN2P51788 898 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 LRRC63Q05C16 580 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 PTPRCAPQ14761 206 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 KRTAP19-4Q3LI73 84 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 ZNF449Q6P9G9 518 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 KIAA1328Q86T90 577 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 TSPYL5Q86VY4 417 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-201ENST00000340660 MED12LQ86YW9 2145 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 GOLM1Q8NBJ4 401 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 FBXO15Q8NCQ5 510 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-201ENST00000340660 ZPLD1Q8TCW7 415 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 DCUN1D1Q96GG9 259 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 TEKT5Q96M29 485 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 MCEEQ96PE7 176 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 GSDMAQ96QA5 445 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 RASL10BQ96S79 203 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 TUBA1CQ9BQE3 449 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 CACNG6Q9BXT2 260 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 UGT2B28Q9BY64 529 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 ADAP2Q9NPF8 381 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 GPATCH2Q9NW75 528 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 QPCTLQ9NXS2 382 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 DUSP13Q9UII6 198 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 KLHL21Q9UJP4 597 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 MAPRE3Q9UPY8 281 aa10.02□□□□□ -0.81
ATXN3-201ENST00000340660 GOLGA6L4A6NEF3 574 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 GOLGA6L9A6NEM1 432 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 A8MUA0 341 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 G3V4G9 280 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 SGK494L7N484 410 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 SCAMP2O15127 329 aaKnown RBP10.01□□□□□ -0.81
ATXN3-201ENST00000340660 P04436 131 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 ATP1B2P14415 290 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-201ENST00000340660 TPSB2P20231 275 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 ARL4AP40617 200 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 BCL6P41182 706 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 KCNC1P48547 511 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 KLF1Q13351 362 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-201ENST00000340660 GAB1Q13480 694 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 RCAN2Q14206 197 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 TPSAB1Q15661 275 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 KPRPQ5T749 579 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-201ENST00000340660 RHOUQ7L0Q8 258 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 REC114Q7Z4M0 266 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 ADGRE4PQ86SQ3 457 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 UCN3Q969E3 161 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 OR2A5Q96R48 311 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 CCT8L2Q96SF2 557 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 SLC39A3Q9BRY0 314 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 KLHL4Q9C0H6 718 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 ACBD3Q9H3P7 528 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 SIX2Q9NPC8 291 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 REV1Q9UBZ9 1251 aa10.01□□□□□ -0.81
ATXN3-201ENST00000340660 KDM1AO60341 852 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 LY6HO94772 140 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 YEATS4O95619 227 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 NUDT17P0C025 328 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 IL1RNP18510 177 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 IL1R2P27930 398 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 KCNJ5P48544 419 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 BRD3Q15059 726 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 SLC14A2Q15849 920 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 NHSL2Q5HYW2 709 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 CLEC17AQ6ZS10 378 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 CNTD1Q8N815 330 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 KBTBD8Q8NFY9 601 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 OR6P1Q8NGX9 317 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 SREK1Q8WXA9 508 aaKnown RBP10□□□□□ -0.81
ATXN3-201ENST00000340660 PGM2Q96G03 612 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 PEX11GQ96HA9 241 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 ZWILCHQ9H900 591 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 SYBUQ9NX95 663 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 CLCF1Q9UBD9 225 aa10□□□□□ -0.81
ATXN3-201ENST00000340660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10□□□□□ -0.81
ATXN3-201ENST00000340660 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 CCT8L1PA6NM43 557 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 WWP2O00308 870 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 MFSD11O43934 449 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 DNAJA2O60884 412 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 VPS26AO75436 327 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 RDH16O75452 317 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 CSF3P09919 207 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 RALBP11234 206 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 CYP4B1P13584 511 aa9.99□□□□□ -0.81
ATXN3-201ENST00000340660 TBXA2RP21731 343 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms