RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ELMOD2Q8IZ81 293 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 ZNF366Q8N895 744 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 TP53I13Q8NBR0 393 aaPredicted RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 C11orf24Q96F05 449 aaPredicted RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SLC6A18Q96N87 628 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 COQ7Q99807 217 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 ABCB9Q9NP78 766 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SPATA6Q9NWH7 488 aaPredicted RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 POFUT2Q9Y2G5 429 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 CKAP5Q14008 2032 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 TSPAN6O43657 245 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SGTAO43765 313 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 CSO75390 466 aaKnown RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SNX4O95219 450 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 NTN1O95631 604 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 ATP1B2P14415 290 aaPredicted RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SOX6P35712 828 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 DEFA1P59665 94 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 DEFA3P59666 94 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 GPR33Q49SQ1 333 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 KIAA1841Q6NSI8 718 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 PRR23CQ6ZRP0 262 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 GALNT12Q8IXK2 581 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 DTX3Q8N9I9 347 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 HJURPQ8NCD3 748 aaPredicted RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 UBASH3BQ8TF42 649 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 RAB8BQ92930 207 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 PHOX2BQ99453 314 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 C2orf49Q9BVC5 232 aaPredicted RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 RUVBL1Q9Y265 456 aaKnown RBP11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SPEF1Q9Y4P9 236 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 YIPF1Q9Y548 306 aa11.42□□□□□ -0.58
CCDC144CP-201ENST00000340196 SZT2Q5T011 3432 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TRBC2A0A5B9 178 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 GFYI3L273 518 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TNFRSF21O75509 655 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 IL7P13232 177 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 CYP2A7P20853 494 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SERPINA4P29622 427 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 PUM1Q14671 1186 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 RETSATQ6NUM9 610 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SHFQ7M4L6 423 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 NPAS4Q8IUM7 802 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 ZFP41Q8N8Y5 198 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 LSM14AQ8ND56 463 aaKnown RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 OR2AP1Q8NGE2 309 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SCLYQ96I15 445 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 ZNF556Q9HAH1 456 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 STOX2Q9P2F5 926 aaPredicted RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 PLXNB3Q9ULL4 1909 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 MEIOCA2RUB1 952 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 AGAP14A8MT82 685 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 H3BN98 237 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SMLR1H3BR10 107 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 CHI3L1P36222 383 aaPredicted RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 GNG2P59768 71 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 FLYWCH1Q4VC44 716 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TPRG1Q6ZUI0 275 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 HSD11B1LQ7Z5J1 315 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 DNAJB7Q7Z6W7 309 aaPredicted RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TAGAPQ8N103 731 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 ASCC1Q8N9N2 400 aaKnown RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 OR9Q1Q8NGQ5 310 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SORCS1Q8WY21 1168 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 DEPDC7Q96QD5 511 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 RAD9AQ99638 391 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TMEM175Q9BSA9 504 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 ANKHQ9HCJ1 492 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 FTSJ1Q9UET6 329 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TBX21Q9UL17 535 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 LRFN2Q9ULH4 789 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SNX11Q9Y5W9 270 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 RTCAO00442 366 aaKnown RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SLITRK5O94991 958 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 IGSF6O95976 241 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 C8GP07360 202 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 PTNP21246 168 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 IMPA1P29218 277 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 WEE1P30291 646 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 CDK6Q00534 326 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 GCNT6Q5T4J0 391 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 PLAG1Q6DJT9 500 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 COMMD6Q7Z4G1 85 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 CAMKK1Q8N5S9 505 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 SCRN2Q96FV2 425 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 FCRL1Q96LA6 429 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 ACAT2Q9BWD1 397 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TAPBPLQ9BX59 468 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 MRPL9Q9BYD2 267 aaKnown RBP11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 IRF2BPLQ9H1B7 796 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 TMEM39AQ9NV64 488 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 MKLN1Q9UL63 735 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 CFL2Q9Y281 166 aa11.41□□□□□ -0.58
CCDC144CP-201ENST00000340196 PCM1Q15154 2024 aa11.4□□□□□ -0.58
CCDC144CP-201ENST00000340196 ALPK3Q96L96 1907 aa11.4□□□□□ -0.58
CCDC144CP-201ENST00000340196 TRAV19A0A0A6YYK7 116 aa11.4□□□□□ -0.58
CCDC144CP-201ENST00000340196 FADS2P1A8MWK0 482 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms