RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OR5P2Q8WZ92 322 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 RSC1A1Q92681 617 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 NLNQ9BYT8 704 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 TWSG1Q9GZX9 223 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 CHRDQ9H2X0 955 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 C1GALT1Q9NS00 363 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 DNAJB9Q9UBS3 223 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 PCDHGA2Q9Y5H1 932 aa21.27■■□□□ 1
PDLIM2-203ENST00000339162 C2orf74A8MZ97 194 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 TBX19O60806 448 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 PRSS23O95084 383 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 FKBP9O95302 570 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 OPN1SWP03999 348 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 ALPPL2P10696 532 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 UQCRC2P22695 453 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 CHN2P52757 468 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 TRA2BP62995 288 aaKnown RBP21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 TMEM26Q6ZUK4 368 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 FKBP9P1Q75LS8 142 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 EID3Q8N140 333 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 PACRGLQ8N7B6 248 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 PJA1Q8NG27 643 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 NFKBIDQ8NI38 313 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 ZFPM2Q8WW38 1151 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 SOX17Q9H6I2 414 aaPredicted RBP21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 MAGIXQ9H6Y5 334 aa21.27■□□□□ 0.99
PDLIM2-203ENST00000339162 MYOCOSA0A1B0GUC4 107 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 A0A1W2PS29 197 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 hCG_2039718K7EN88 272 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 TNFSF14O43557 240 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 DIRAS1O95057 198 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 EIF2S1P05198 315 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 BCKDHBP21953 392 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 GCNT6Q5T4J0 391 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 MRM1Q6IN84 353 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 STK32CQ86UX6 486 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 ZDHHC21Q8IVQ6 265 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 ZC3H7AQ8IWR0 971 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 CHERPQ8IWX8 916 aaKnown RBP21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 LMX1AQ8TE12 382 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 HSH2DQ96JZ2 352 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 SIRT3Q9NTG7 399 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 ZNF639Q9UID6 485 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 PADI4Q9UM07 663 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 ABCG2Q9UNQ0 655 aa21.26■□□□□ 0.99
PDLIM2-203ENST00000339162 EME2A4GXA9 379 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 TLR4O00206 839 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 B4GALT2O60909 372 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 AIFM1O95831 613 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 CSF2P04141 144 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 GNAO1P09471 354 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 C8orf89P0DMQ9 161 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 PCGF2P35227 344 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 PUS10Q3MIT2 529 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 CBLL1Q75N03 491 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 MAPKAP1Q9BPZ7 522 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 FAIM2Q9BWQ8 316 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 SPATA9Q9BWV2 254 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 EPS8L2Q9H6S3 715 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 TM9SF3Q9HD45 589 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 DPPA5A6NC42 116 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 C9P02748 559 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 SLC35G6P0C7Q6 338 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 DRD2P14416 443 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 FRKP42685 505 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 RPS9P46781 194 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 MLLT1Q03111 559 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 RGS1Q08116 209 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 SPDYE7PQ495Y7 208 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 ANKRD34AQ69YU3 496 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 TNFAIP8L2Q6P589 184 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 SZRD1Q7Z422 152 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 TMEM179BQ7Z7N9 219 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 SRFBP1Q8NEF9 429 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 ZBED6CLQ96FA7 236 aaPredicted RBP21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 GLIPR2Q9H4G4 154 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 SLC35C2Q9NQQ7 365 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 RPS6KA6Q9UK32 745 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 PILRAQ9UKJ1 303 aa21.25■□□□□ 0.99
PDLIM2-203ENST00000339162 KRT75O95678 551 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 CLIC3O95833 236 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 IL1RNP18510 177 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 GSTM5P46439 218 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 RACK1P63244 317 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 DMWDQ09019 674 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 SCARB2Q14108 478 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 DEFB134Q4QY38 66 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 EIF3MQ7L2H7 374 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 CADM4Q8NFZ8 388 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 UTP15Q8TED0 518 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 TFAP2CQ92754 450 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 MAGED4Q96JG8 741 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 MUC3AQ02505 3323 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 G3V2T6 193 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 SDC3O75056 442 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 DNAJB6O75190 326 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 SNAP29O95721 258 aa21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 NME1P15531 152 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-203ENST00000339162 VLDLRP98155 873 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms