RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LTA4HP09960 611 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 CASP2P42575 452 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 DDX39BQ13838 428 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 HIST2H2ACQ16777 129 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 HIST2H2AA3Q6FI13 130 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 Q6ZPB1 254 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 MCEMP1Q8IX19 187 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF595Q8IYB9 648 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ARMC10Q8N2F6 343 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF808Q8N4W9 903 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 OR7G3Q8NG95 312 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 OR52N2Q8NGI0 321 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 AGAP11Q8TF27 550 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 VMP1Q96GC9 406 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 MAGED4Q96JG8 741 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 EFCAB11Q9BUY7 163 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 OR8D2Q9GZM6 311 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 COPS7BQ9H9Q2 264 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ZDHHC18Q9NUE0 388 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 PPIEQ9UNP9 301 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 ACOT9Q9Y305 439 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 MEMO1Q9Y316 297 aa12.43□□□□□ -0.42
NUDCD3-201ENST00000338427 K7EPI3 171 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 HRKO00198 91 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 FCHO1O14526 889 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CDC40O60508 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 ABOP16442 354 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF24P17028 368 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CRABP2P29373 138 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 KIR3DL1P43629 444 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 PIK3CGP48736 1102 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CAV1Q03135 178 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 STX4Q12846 297 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 SLAMF1Q13291 335 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 LAPTM5Q13571 262 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 TBCCQ15814 346 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 UAP1Q16222 522 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF630Q2M218 657 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CMPK2Q5EBM0 449 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 DEPDC1Q5TB30 811 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 C18orf63Q68DL7 685 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 MED27Q6P2C8 311 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 TBC1D1Q86TI0 1168 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 TICAM1Q8IUC6 712 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 LAS2Q8IYD9 372 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 SLC34A3Q8N130 599 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CYP4Z2PQ8N1L4 340 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 PLD6Q8N2A8 252 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 FAM98AQ8NCA5 519 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 TMEM125Q96AQ2 219 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 MTFMTQ96DP5 389 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 GPR78Q96P69 363 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 MTERF1Q99551 399 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 TBCDQ9BTW9 1192 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 PITHD1Q9GZP4 211 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 ADAP2Q9NPF8 381 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 NUDT4Q9NZJ9 180 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 OPTCQ9UBM4 332 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 VTI1BQ9UEU0 232 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CLCA3PQ9Y6N3 262 aa12.42□□□□□ -0.42
NUDCD3-201ENST00000338427 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 C17orf105B2RV13 164 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 FGF17O60258 216 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 KERAO60938 352 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 SIX3O95343 332 aaPredicted RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 HIST1H1TP22492 207 aaPredicted RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 CPN2P22792 545 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 SOX3P41225 446 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 SSR4P51571 173 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 NEK2P51955 445 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 HK2P52789 917 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 CASP6P55212 293 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 RPS13P62277 151 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 E2F2Q14209 437 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 ELAVL1Q15717 326 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 PFKFB4Q16877 469 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 AP5B1Q2VPB7 878 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 PAGE2BQ5JRK9 111 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 OR4C11Q6IEV9 310 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 LRRC70Q7Z2Q7 622 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 GHDCQ8N2G8 530 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 TMEM132CQ8N3T6 1108 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 C16orf52Q8NHV5 167 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 HUS1BQ8NHY5 278 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 SEC16BQ96JE7 1060 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 RASL10BQ96S79 203 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 CCDC77Q9BR77 488 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 SNX15Q9NRS6 342 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 NINJ2Q9NZG7 142 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 MYOTQ9UBF9 498 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 DMGDHQ9UI17 866 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 YARS2Q9Y2Z4 477 aaKnown RBP12.41□□□□□ -0.42
NUDCD3-201ENST00000338427 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms