RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KLHDC8AQ8IYD2 350 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 NUP43Q8NFH3 380 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 HDHD2Q9H0R4 259 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLITRK2Q9H156 845 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 AGPAT4Q9NRZ5 378 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 STOML2Q9UJZ1 356 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF860A6NHJ4 632 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SCN2BO60939 215 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TMCC2O75069 709 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CCDC159P0C7I6 412 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 FAM180BQ6P0A1 224 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 POMGNT2Q8NAT1 580 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ART5Q96L15 291 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SORBS1Q9BX66 1292 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 OR51I1Q9H343 314 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SMCHD1A6NHR9 2005 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TYRP1P17643 537 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MYF6P23409 242 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CRISP1P54107 249 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MYBPC1Q00872 1141 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF542PQ5EBM4 170 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 COLEC12Q5KU26 742 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM151AQ8N4L1 468 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 OR56A1Q8NGH5 318 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ISOC1Q96CN7 298 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MCHR1Q99705 422 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 C1QTNF3Q9BXJ4 246 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SERHL2Q9H4I8 314 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SERHLQ9NQF3 203 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MRTO4Q9UKD2 239 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLC30A4O14863 429 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 P2RY2P41231 377 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLAMF1Q13291 335 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TUBA3CQ13748 450 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 DEFB134Q4QY38 66 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ADIPOR2Q86V24 386 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 NRROSQ86YC3 692 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 DCAF13Q9NV06 445 aaKnown RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MARK1Q9P0L2 795 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 C5AR2Q9P296 337 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CAB39Q9Y376 341 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 OR5K4A6NMS3 321 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TSPAN12O95859 305 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 HLA-DQA2P01906 255 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 MMP12P39900 470 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 PCDH1Q08174 1060 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 UGT8Q16880 541 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 Q6ZNB5 142 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLCO4C1Q6ZQN7 724 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 SLC9B2Q86UD5 537 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TCEANCQ8N8B7 351 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 OR4C6Q8NH72 309 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TFAP2CQ92754 450 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CHFRQ96EP1 664 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ZSWIM3Q96MP5 696 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ASB1Q9Y576 335 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ENPP4Q9Y6X5 453 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ANK1P16157 1881 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 GABRR3A8MPY1 467 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF26P17031 533 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-202ENST00000338368 RAB39AQ14964 217 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM44Q2T9K0 475 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CCSMST1Q4G0I0 132 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 OR52E8Q6IFG1 317 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CACTIN-AS1Q8N1I8 211 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 CRELD1Q96HD1 420 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 TPSD1Q9BZJ3 242 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 ERVK-18Q9QC07 812 aa6.02□□□□□ -1.45
PRKDC-202ENST00000338368 A0A1B0GTL3 188 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 EMC8O43402 210 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CCR2P41597 374 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 BLVRAP53004 296 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 DCDC1P59894 354 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 HENMT1Q5T8I9 393 aaKnown RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CLIP4Q8N3C7 705 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SPATA9Q9BWV2 254 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 RSPH9Q9H1X1 276 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PELI2Q9HAT8 420 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 Q9N2J8 555 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ZC4H2Q9NQZ6 224 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 MAN2B2Q9Y2E5 1009 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 PIAS3Q9Y6X2 628 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SNX4O95219 450 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 NPPBP16860 134 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 MXD1Q05195 221 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 CLEC12AQ5QGZ9 265 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TMC8Q8IU68 726 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 SLC5A8Q8N695 610 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 DIABLOQ9NR28 239 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 MS4A12Q9NXJ0 267 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 OR51B4Q9Y5P0 310 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 HEATR1Q9H583 2144 aaKnown RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ANHXE9PGG2 379 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 ID2Q02363 134 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 NPRL3Q12980 569 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 COL9A2Q14055 689 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-202ENST00000338368 TMPRSS11AQ6ZMR5 421 aa6.01□□□□□ -1.45
PRKDC-202ENST00000338368 DCP2Q8IU60 420 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms