RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 EPYCQ99645 322 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 NPLQ9BXD5 320 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PRDM9Q9NQV7 894 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GPR83Q9NYM4 423 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SC5DO75845 299 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 HOXD8P13378 290 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CHATP28329 748 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 NRIP1P48552 1158 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 TRAM2Q15035 370 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SPHARQ15513 63 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 DPYSL2Q16555 572 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 C10orf62Q5T681 223 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 APOBEC3HQ6NTF7 200 aaKnown RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 TMEM205Q6UW68 189 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CXCL17Q6UXB2 119 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 THOC6Q86W42 341 aaKnown RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 DCUN1D4Q92564 292 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CMTM7Q96FZ5 175 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 HDHD5Q9BXW7 423 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 OR2AG1Q9H205 316 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ACSL6Q9UKU0 697 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 A0A0U1RQK1 487 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SMIM28A0A1B0GU29 152 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 A8MUA0 341 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GBAP04062 536 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CDK1P06493 297 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GDF5P43026 501 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 BDKRB1P46663 353 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PTH2RP49190 550 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 NFATC4Q14934 902 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 FAM214AQ32MH5 1076 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GTF2H4Q92759 462 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF436Q9C0F3 470 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SIRPGQ9P1W8 387 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CA5BQ9Y2D0 317 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CEP170BQ9Y4F5 1589 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 WASHC1A8K0Z3 465 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CNTN5O94779 1100 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 POP4O95707 220 aaKnown RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 FTHL17Q9BXU8 183 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PRKCGP05129 697 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ELNP15502 786 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 RAB6AP20340 208 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 OR1D2P34982 312 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GAS6Q14393 721 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 C14orf28Q4W4Y0 310 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PIWIL3Q7Z3Z3 882 aaKnown RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ELP5Q8TE02 316 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GPR22Q99680 433 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GPATCH2Q9NW75 528 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ANKMY1Q9P2S6 941 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 A0A1W2PQL4 384 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 OTOL1A6NHN0 477 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 PROS1P07225 676 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 C8orf89P0DMQ9 161 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 TAS2R50P59544 299 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 CXCL9Q07325 125 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GRIK2Q13002 908 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 OLIG2Q13516 323 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 TLDC1Q6P9B6 456 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 GDPD1Q8N9F7 314 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 NR4A3Q92570 626 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 THRSPQ92748 146 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 VRK1Q99986 396 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 KATNBL1Q9H079 304 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 ZBTB20Q9HC78 741 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-201ENST00000334504 SERINC1Q9NRX5 453 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 DHDHQ9UQ10 334 aa9.45□□□□□ -0.9
COL4A6-201ENST00000334504 LYPLA2O95372 231 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PRNPP04156 253 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 MAOAP21397 527 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 VIPR1P32241 457 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NDUFAF5Q5TEU4 345 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 C1orf94Q6P1W5 598 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 GLIS1Q8NBF1 620 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 FKBP10Q96AY3 582 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 KIF20BQ96Q89 1820 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 E9PI62 339 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 M0R2N6 131 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NDUFS4O43181 175 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ERI3O43414 337 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 TYROBPO43914 113 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ERCC1P07992 297 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SNRNP70P08621 437 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 HTR1EP28566 365 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 HSD17B2P37059 387 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NAA10P41227 235 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CAV3P56539 151 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SLC36A3Q495N2 470 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PRAMEF14Q5SWL7 426 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CATSPERGQ6ZRH7 1159 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 FAM83HQ6ZRV2 1179 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ABHD13Q7L211 337 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PXKQ7Z7A4 578 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PLD6Q8N2A8 252 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 TTLQ8NG68 377 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 OR8J3Q8NGG0 315 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 OR14C36Q8NHC7 312 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms