RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF726A6NNF4 738 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 J3KR12 359 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 EPHB6O15197 1021 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TYROBPO43914 113 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TBL1XO60907 577 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 POP4O95707 220 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 AMY2BP19961 511 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 LEPRP48357 1165 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 WNT4P56705 351 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ESCO2Q56NI9 601 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RHBDF2Q6PJF5 856 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HFE2Q6ZVN8 426 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM200AQ86VY9 491 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SERPINA9Q86WD7 417 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf52Q8N6N3 182 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TCEANCQ8N8B7 351 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ZFAND1Q8TCF1 268 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 EBF4Q9BQW3 602 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 Q9N2J8 555 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM248Q9NWD8 314 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 C14orf119Q9NWQ9 140 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NPIPA7E9PJI5 369 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MANBAO00462 879 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NPIPA8P0DM63 369 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NIPAL4Q0D2K0 466 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RAP1GAP2Q684P5 730 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PGM2L1Q6PCE3 622 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 FBXO16Q8IX29 292 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SIDT2Q8NBJ9 832 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PPTC7Q8NI37 304 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ZDHHC1Q8WTX9 485 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 METTL2AQ96IZ6 378 aaKnown RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CACNG6Q9BXT2 260 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CNTNAP3Q9BZ76 1288 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ABCG8Q9H221 673 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TPT1P8Q9HAU6 139 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PLEKHA3Q9HB20 300 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MEGF11A6BM72 1044 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 AHSA1O95433 338 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HDCP19113 662 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 DDOSTP39656 456 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RRAS2P62070 204 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SCAPQ12770 1279 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PPP1R26Q5T8A7 1209 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HIST2H3PS2Q5TEC6 136 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ARL9Q6T311 187 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 LINGO4Q6UY18 593 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 LILRB2Q8N423 598 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CAMKVQ8NCB2 501 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 C22orf15Q8WYQ4 148 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RADILQ96JH8 1075 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ABHD16BQ9H3Z7 469 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TNS2Q63HR2 1409 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 C17orf112F2Z3M2 114 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SLC1A7O00341 560 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 F10P00742 488 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ELK4P28324 431 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ERVK-25P63136 954 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CDK6Q00534 326 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MELKQ14680 651 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CHST9Q7L1S5 443 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RDH10Q8IZV5 341 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 IL31RAQ8NI17 732 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ANGPTL6Q8NI99 470 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 MUS81Q96NY9 551 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 BPIFA1Q9NP55 256 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 KCNJ16Q9NPI9 418 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 AGPAT4Q9NRZ5 378 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 BLACEA4D250 179 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PSMD9O00233 223 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 EIF3FO00303 357 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CASRP41180 1078 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HSPA7P48741 367 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TUSC3Q13454 348 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 FAM162BQ5T6X4 162 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 ZDHHC24Q6UX98 284 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 KCNJ9Q92806 393 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NKD1Q969G9 470 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 KIAA1191Q96A73 305 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PYCR2Q96C36 320 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 RLIMQ9NVW2 624 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 NFS1Q9Y697 457 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TEX264Q9Y6I9 313 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 E9PI62 339 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 WNT7AO00755 349 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 BDNFP23560 247 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TLE4Q04727 773 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 PMS2P3Q13401 168 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TBCEQ15813 527 aaPredicted RBP5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM236Q5W0B7 351 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR4K2Q8NGD2 314 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR2T35Q8NGX2 323 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 TRIB2Q92519 343 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 GAL3ST1Q99999 423 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 CCM2Q9BSQ5 444 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 OR2AG1Q9H205 316 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms