RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ACPTQ9BZG2 426 aa9.03□□□□□ -0.96
C11orf54-201ENST00000331239 BRINP2Q9C0B6 783 aa9.03□□□□□ -0.96
C11orf54-201ENST00000331239 DDX31Q9H8H2 851 aaKnown RBP9.03□□□□□ -0.96
C11orf54-201ENST00000331239 FBXO8Q9NRD0 319 aa9.03□□□□□ -0.96
C11orf54-201ENST00000331239 ZIM2Q9NZV7 527 aa9.03□□□□□ -0.96
C11orf54-201ENST00000331239 SERTAD3Q9UJW9 196 aa9.03□□□□□ -0.96
C11orf54-201ENST00000331239 SRPK3Q9UPE1 567 aa9.03□□□□□ -0.96
C11orf54-201ENST00000331239 GOLGA4Q13439 2230 aaKnown RBP9.03□□□□□ -0.96
C11orf54-201ENST00000331239 IGHV5-10-1A0A0J9YXX1 117 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 CCDC160A6NGH7 325 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 LCMT2O60294 686 aaKnown RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 BMP2P12643 396 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 SLC6A2P23975 617 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 PSMA4P25789 261 aaKnown RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 NR1H2P55055 460 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 ACSM2AQ08AH3 577 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 LRRC74AQ0VAA2 488 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 BIKQ13323 160 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 CAPRIN1Q14444 709 aaKnown RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 KIAA0040Q15053 153 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 SPATS1Q496A3 300 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 TBCELQ5QJ74 424 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 ACSM2BQ68CK6 577 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 KRT80Q6KB66 452 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 VN1R5Q7Z5H4 357 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 VN1R4Q7Z5H5 301 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 ZNF761Q86XN6 746 aaPredicted RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 TTC29Q8NA56 475 aaPredicted RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 GOLM1Q8NBJ4 401 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 AGBL5Q8NDL9 886 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 JPH3Q8WXH2 748 aaPredicted RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 LRRC58Q96CX6 371 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 DEPDC7Q96QD5 511 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 PNPLA3Q9NST1 481 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 CCM2LQ9NUG4 571 aaPredicted RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 LYARQ9NX58 379 aaKnown RBP9.02□□□□□ -0.96
C11orf54-201ENST00000331239 CMTM6Q9NX76 183 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 MS4A12Q9NXJ0 267 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 CDC14AQ9UNH5 594 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 GPR45Q9Y5Y3 372 aa9.02□□□□□ -0.96
C11orf54-201ENST00000331239 ASCC3Q8N3C0 2202 aaKnown RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 IGHV5-51A0A0C4DH38 117 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 MAGEB17A8MXT2 336 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 H0YGG7 62 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 FFAR3O14843 346 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 GPR42O15529 346 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 NDUFS4O43181 175 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 TPD52L2O43399 206 aaKnown RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 CTSVO60911 334 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 CYC1P08574 325 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 GCGRP47871 477 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 HNRNPFP52597 415 aaKnown RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 RAB15P59190 212 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 ARF3P61204 181 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 RPS13P62277 151 aaKnown RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 RCAN2Q14206 197 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 NR6A1Q15406 480 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 DPY19L1Q2PZI1 675 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 AP5B1Q2VPB7 878 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 AMZ1Q400G9 498 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 PPP4R4Q6NUP7 873 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 TMEM214Q6NUQ4 689 aaKnown RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 TRIM40Q6P9F5 258 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 B3GNT6Q6ZMB0 384 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 ZNF574Q6ZN55 896 aaPredicted RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 ZBTB49Q6ZSB9 765 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 MSANTD1Q6ZTZ1 278 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 PACRGLQ8N7B6 248 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 MS4A6EQ96DS6 147 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 TEFMQ96QE5 360 aaKnown RBP9.02□□□□□ -0.97
C11orf54-201ENST00000331239 SLC29A1Q99808 456 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 ANKRD60Q9BZ19 345 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 CAAP1Q9H8G2 361 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 LYRM4Q9HD34 91 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 FAM86C1Q9NVL1 165 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 AIG1Q9NVV5 245 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 ACTR3BQ9P1U1 418 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 AURKCQ9UQB9 309 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 RP1P56715 2156 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 UNC13CQ8NB66 2214 aa9.02□□□□□ -0.97
C11orf54-201ENST00000331239 A0A1W2PP18 115 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ARPC2O15144 300 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 HNRNPRO43390 633 aaKnown RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 FGF5P12034 268 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 NAT1P18440 290 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 DIO3P55073 304 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 GFERP55789 205 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ITGA1P56199 1179 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 KCNK10P57789 538 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MC2RQ01718 297 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 NKAIN2Q5VXU1 208 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 OR4C11Q6IEV9 310 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ABHD17CQ6PCB6 329 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 BORAQ6PGQ7 559 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 FAM92BQ6ZTR7 304 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms