RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RETREG3Q86VR2 466 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 PPP1R3BQ86XI6 285 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 RIMKLAQ8IXN7 391 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 METTL4Q8N3J2 472 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 SLC13A3Q8WWT9 602 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 POP5Q969H6 163 aaKnown RBP15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 ASB9Q96DX5 294 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 MTERF3Q96E29 417 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 TEX37Q96LM6 180 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 BBC3Q96PG8 261 aaPredicted RBP15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 ZPBPQ9BS86 351 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 ADA2Q9NZK5 511 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 ADAM29Q9UKF5 820 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 RARRES3Q9UL19 164 aa15.6■□□□□ 0.09
PDLIM1-201ENST00000329399 H3BMH7 237 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 K7ENP7 123 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 HSD17B1P14061 328 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 MAGP20916 626 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TIA1P31483 386 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■■□□□ 12.3
PDLIM1-201ENST00000329399 EEFSECP57772 596 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 BNIP2Q12982 314 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TRIM25Q14258 630 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 PTGR1Q14914 329 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 DEPDC1Q5TB30 811 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 FCRL6Q6DN72 434 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 FAM199XQ6PEV8 388 aaPredicted RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 INO80CQ6PI98 192 aaPredicted RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 RIPOR1Q6ZS17 1223 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 NLGN4XQ8N0W4 816 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 CARFQ8N187 725 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 C19orf47Q8N9M1 422 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 GOLM1Q8NBJ4 401 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 SRFBP1Q8NEF9 429 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TRPV3Q8NET8 790 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 VPS37AQ8NEZ2 397 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 NLGN4YQ8NFZ3 816 aaPredicted RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 OR8J3Q8NGG0 315 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 THAP11Q96EK4 314 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ITCHQ96J02 903 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 SPRTNQ9H040 489 aaPredicted RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 PRM3Q9NNZ6 103 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 PDE7BQ9NP56 450 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 FAM120CQ9NX05 1096 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 CD300AQ9UGN4 299 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 MCM8Q9UJA3 840 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 MAN2B2Q9Y2E5 1009 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 L3MBTL1Q9Y468 752 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 KLK4Q9Y5K2 254 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 MRPS18BQ9Y676 258 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 A0A0J9YY10 115 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TMEM150CB9EJG8 249 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ANXA4P09525 319 aaPredicted RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 HPCAL1P37235 193 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TSFMP43897 325 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TRPC1P48995 793 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 AP2B1P63010 937 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 CSNK1G2P78368 415 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ACY1Q03154 408 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 VAC14Q08AM6 782 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ZNF763Q0D2J5 394 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 RBBP5Q15291 538 aaKnown RBP15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 SLC5A12Q1EHB4 618 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TIGD2Q4W5G0 525 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 MANEAQ5SRI9 462 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ANXA8L1Q5VT79 327 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ZFP1Q6P2D0 407 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 PCSK4Q6UW60 755 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 CCDC81Q6ZN84 652 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 GPR180Q86V85 440 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 DNAJC22Q8N4W6 341 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 IL22RA1Q8N6P7 574 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 OR2L3Q8NG85 312 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 OR8J2Q8NGG1 315 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 CLPTM1LQ96KA5 538 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ACAT2Q9BWD1 397 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 SYNPO2LQ9H987 977 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 ATAD3AQ9NVI7 634 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 SH2B3Q9UQQ2 575 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 DLGAP4Q9Y2H0 992 aa15.59■□□□□ 0.09
PDLIM1-201ENST00000329399 TLN1Q9Y490 2541 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 H7BY64 318 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 TERTO14746 1132 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 BCAS2O75934 225 aaPredicted RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 CD1EP15812 388 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 HNRNPH1P31943 449 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 TMPRSS3P57727 454 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 TRA2BP62995 288 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 MAP7Q14244 749 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 SF1Q15637 639 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 FAM174BQ3ZCQ3 159 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 BROXQ5VW32 411 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 KHDRBS2Q5VWX1 349 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 C6orf15Q6UXA7 325 aaPredicted RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 DHDDSQ86SQ9 333 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 HPS6Q86YV9 775 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 C1orf52Q8N6N3 182 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 TNIP2Q8NFZ5 429 aa15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 SNRNP27Q8WVK2 155 aaKnown RBP15.58■□□□□ 0.08
PDLIM1-201ENST00000329399 WDR60Q8WVS4 1066 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms