RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MCM8Q9UJA3 840 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 PCDHB14Q9Y5E9 798 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 ADAMTS20P59510 1910 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 C4orf51C9J302 202 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 RFXANKO14593 260 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 TOX3O15405 576 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SCN2BO60939 215 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 CAPNS1P04632 268 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 GPIP06744 558 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 ANKRD34CP0C6C1 535 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 UMPSP11172 480 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 NELFEP18615 380 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 PTPN6P29350 595 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 RPL3P39023 403 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 WNT3P56703 355 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SNRPNP63162 240 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 COL9A2Q14055 689 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 TRIP10Q15642 601 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 UBE3DQ7Z6J8 389 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 B3GNT8Q7Z7M8 397 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 KMT5CQ86Y97 462 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SPPL2CQ8IUH8 684 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 CSNK1A1LQ8N752 337 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 KCT2Q8NC54 265 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 DEFB124Q8NES8 71 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 WDR48Q8TAF3 677 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SLCO4A1Q96BD0 722 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 COQ8BQ96D53 544 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 NAF1Q96HR8 494 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 CCDC115Q96NT0 180 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 THUMPD3Q9BV44 507 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SORBS1Q9BX66 1292 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SLC6A16Q9GZN6 736 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 COPS7BQ9H9Q2 264 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 STARD5Q9NSY2 213 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 TOR4AQ9NXH8 423 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 ATP6V1HQ9UI12 483 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 AGRPO00253 132 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 RTCAO00442 366 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 PLPP1O14494 284 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 RFPL3O75679 317 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 SLC35G6P0C7Q6 338 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 LIMK1P53667 647 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 RGS1Q08116 209 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 GPR19Q15760 415 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 ADPRMQ3LIE5 342 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 PHF19Q5T6S3 580 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 CPTPQ5TA50 214 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 ANXA8L1Q5VT79 327 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 LILRA2Q8N149 483 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 CATSPER1Q8NEC5 780 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 VPS37AQ8NEZ2 397 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 MS4A6EQ96DS6 147 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 CPPED1Q9BRF8 314 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 DUSP26Q9BV47 211 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 MYNNQ9NPC7 610 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 BTNL2Q9UIR0 455 aa17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 COL27A1Q8IZC6 1860 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-201ENST00000327304 A0A0G2JN53 185 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 DHRS12A0PJE2 317 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 GABRR3A8MPY1 467 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 FOLR1P15328 257 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 PSMA4P25789 261 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 PEX2P28328 305 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 PDX1P52945 283 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 OR4D2P58180 307 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 TRIP6Q15654 476 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 MTX3Q5HYI7 312 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 LPCAT4Q643R3 524 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 IZUMO2Q6UXV1 221 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 IKBIPQ70UQ0 350 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 R3HCC1LQ7Z5L2 792 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 KBTBD2Q8IY47 623 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 TMEM102Q8N9M5 508 aaPredicted RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 CAMKVQ8NCB2 501 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 OR2T12Q8NG77 320 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 CDC26Q8NHZ8 85 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 CANT1Q8WVQ1 401 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 MTERF3Q96E29 417 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF570Q96NI8 536 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 PKP2Q99959 881 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 INPP5KQ9BT40 448 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF717Q9BY31 904 aaPredicted RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 REEP4Q9H6H4 257 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 KAT8Q9H7Z6 458 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 LHX9Q9NQ69 397 aa17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 WBP11Q9Y2W2 641 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-201ENST00000327304 PIM1P11309 404 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 PLA2G16P53816 162 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 ILKQ13418 452 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 MAP7Q14244 749 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 TMEM35AQ53FP2 167 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 GLYATQ6IB77 296 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 DNAJC14Q6Y2X3 702 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 ANKRD46Q86W74 232 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 ADCY4Q8NFM4 1077 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 ZCCHC10Q8TBK6 192 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
EXOSC3-201ENST00000327304 PANX1Q96RD7 426 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms