RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 A0A1B0GTL3 188 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 ABHD14A-ACY1A0A1B0GW23 586 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 SOBPA7XYQ1 873 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 APOL3O95236 402 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 CELP19835 753 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 IER5LQ5T953 404 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 ARMC5Q96C12 935 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TMEM246Q9BRR3 403 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 IFT27Q9BW83 186 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 ZSCAN32Q9NX65 697 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 CCDC59Q9P031 241 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 PLAGL1Q9UM63 463 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 AP1M2Q9Y6Q5 423 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 SLC35G6P0C7Q6 338 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TCF3P15923 654 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 ATF6P18850 670 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 NT5EP21589 574 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 RGS6P49758 472 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 C22orf42Q6IC83 251 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 SLC27A4Q6P1M0 643 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 STUB1Q9UNE7 303 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 EXOSC1Q9Y3B2 195 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 COLEC10Q9Y6Z7 277 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3DA0A087WVF3 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3IA0A087WXS9 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3EA0A087X179 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3KA0A087X1G2 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3FA6NER0 549 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3LB9A6J9 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 H7BY64 318 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 GPR37L1O60883 481 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 WBP4O75554 376 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 OXSR1O95747 527 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 KLKB1P03952 638 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3HP0C7X1 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 CPN2P22792 545 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TLE2Q04725 743 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 BIKQ13323 160 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 MAB21L1Q13394 359 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3GQ6DHY5 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3CQ6IPX1 549 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TBC1D3Q8IZP1 549 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 PRAP1Q96NZ9 151 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TTLL2Q9BWV7 592 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 TMEM138Q9NPI0 162 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 PRKAB1Q9Y478 270 aa14.12□□□□□ -0.15
TCOF1-201ENST00000323668 XIRP1Q702N8 1843 aaKnown RBP14.12□□□□□ -0.15
TCOF1-201ENST00000323668 RNASET2O00584 256 aaKnown RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 OR6A2O95222 327 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ACP5P13686 325 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 AOAHP28039 575 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 CDKN2CP42773 168 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 DSG2Q14126 1118 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 GDPGP1Q6ZNW5 385 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 CEP68Q76N32 757 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 SUN5Q8TC36 379 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 C16orf78Q8WTQ4 265 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 LCN9Q8WX39 176 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 LRR1Q96L50 414 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ASB1Q9Y576 335 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 OR12D1P0DN82 309 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 CAPZA2P47755 286 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 PSMD4P55036 377 aaKnown RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ADAM15Q13444 863 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 SYT6Q5T7P8 510 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 PLAG1Q6DJT9 500 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ARL9Q6T311 187 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 NXPE4Q6UWF7 544 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 RTL4Q6ZR62 310 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 LINC00299Q6ZSB3 139 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 RBM23Q86U06 439 aaKnown RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 B3GNT7Q8NFL0 401 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 C17orf50Q8WW18 174 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 WACQ9BTA9 647 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 NMNAT1Q9HAN9 279 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ELOVL2Q9NXB9 296 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 STOML2Q9UJZ1 356 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 FOCADQ5VW36 1801 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 KIAA1217Q5T5P2 1943 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 FAM172BPA6NC97 362 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 NUDT14O95848 222 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 HIST1H2ABP04908 130 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 OSMP13725 252 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 DCDC1P59894 354 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 TRAM2Q15035 370 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 PTGES3Q15185 160 aaKnown RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 UNC5DQ6UXZ4 953 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 HIST3H2AQ7L7L0 130 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 RNF175Q8N4F7 328 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 CHST14Q8NCH0 376 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 HIST1H2ACQ93077 130 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 RAB11FIP5Q9BXF6 653 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ADAP2Q9NPF8 381 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 TAPBPO15533 448 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ENTPD6O75354 484 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 DNTTP04053 509 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ADPRMQ3LIE5 342 aa14.11□□□□□ -0.15
TCOF1-201ENST00000323668 MMAAQ8IVH4 418 aaKnown RBP14.11□□□□□ -0.15
TCOF1-201ENST00000323668 ZNF689Q96CS4 500 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms