RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PRODHO43272 600 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 OR10H3O60404 316 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TPOP07202 933 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ARAFP10398 606 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CD53P19397 219 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 IDSP22304 550 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 APEX1P27695 318 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 WNT3P56703 355 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ARTNQ5T4W7 220 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GLB1LQ6UWU2 654 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CD300LDQ6UXZ3 194 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 UBE2R2Q712K3 238 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 AQP11Q8NBQ7 271 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 OR7G3Q8NG95 312 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PAWRQ96IZ0 340 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NELL2Q99435 816 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BEX2Q9BXY8 128 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BHLHE41Q9C0J9 482 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BTBD1Q9H0C5 482 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SLC25A19Q9HC21 320 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM161AQ9NX61 479 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CLCA3PQ9Y6N3 262 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 A0A1W2PQ67 120 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KRBOX1C9JBD0 128 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PRAF2O60831 178 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 RAF1P04049 648 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 H1F0P07305 194 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TNNI3P19429 210 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 HOXD10P28358 340 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 IRS1P35568 1242 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GIPRP48546 466 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GARNL3Q5VVW2 1013 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C12orf73Q69YU5 71 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PLEKHM3Q6ZWE6 761 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SPNS2Q8IVW8 549 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C2orf15Q8WU43 125 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 RFKQ969G6 155 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TIFAQ96CG3 184 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 IL4I1Q96RQ9 567 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ZIC5Q96T25 663 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KCNJ15Q99712 375 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TSSK6Q9BXA6 273 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ABCG5Q9H222 651 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BRF2Q9HAW0 419 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 FARSBQ9NSD9 589 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ZDHHC3Q9NYG2 299 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KLF15Q9UIH9 416 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SMCHD1A6NHR9 2005 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GNG14A0A1W2PPG7 69 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 AGAP14A8MT82 685 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NBNO60934 754 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 RAB36O95755 333 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 RB1P06400 928 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ZDHHC11BP0C7U3 371 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 AQP1P29972 269 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BDH1Q02338 343 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SNTA1Q13424 505 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 DSG2Q14126 1118 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PLEKHS1Q5SXH7 462 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 HIST2H2AA3Q6FI13 130 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NCEH1Q6PIU2 408 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CD200R1LQ6Q8B3 271 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 USP45Q70EL2 814 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GPR155Q7Z3F1 870 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GPC2Q8N158 579 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C10orf111Q8N326 155 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GTPBP3Q969Y2 492 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 OTUB1Q96FW1 271 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NIPSNAP1Q9BPW8 284 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KATNB1Q9BVA0 655 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SPATA5L1Q9BVQ7 753 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 DPAGT1Q9H3H5 408 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NMNAT1Q9HAN9 279 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ADARB2Q9NS39 739 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ELOVL2Q9NXB9 296 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 UBQLN2Q9UHD9 624 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SLC9A8Q9Y2E8 581 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NPFFR2Q9Y5X5 522 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KAT6AQ92794 2004 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 HBQ1P09105 142 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TIA1P31483 386 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 GABRA5P31644 462 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CSNK1DP48730 415 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ANXA11P50995 505 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 XKP51811 444 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TAF10Q12962 218 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 IL18Q14116 193 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CDC73Q6P1J9 531 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CNIH2Q6PI25 160 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BRAT1Q6PJG6 821 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BAIAP2L2Q6UXY1 529 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 FGD2Q7Z6J4 655 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ADAMTS19Q8TE59 1207 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NUDT8Q8WV74 236 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ADAMTS14Q8WXS8 1223 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SLC38A2Q96QD8 506 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C2orf49Q9BVC5 232 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 BARHL1Q9BZE3 327 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms