RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SRFP11831 508 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 DRD2P14416 443 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 DDX5P17844 614 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 HIST1H1TP22492 207 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 RABIFP47224 123 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 CDK9P50750 372 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 DGKEP52429 567 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 RPS26P62854 115 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 KCNAB2Q13303 367 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 SLC9A5Q14940 896 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ZNF630Q2M218 657 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 SAXO2Q658L1 398 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 KIAA0895LQ68EN5 471 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 CCDC80Q76M96 950 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 PAQR7Q86WK9 346 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ACOT4Q8N9L9 421 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 OR2L5Q8NG80 312 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 FLVCR1-AS1Q8TAF5 88 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 NEURL3Q96EH8 262 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ZBED6CLQ96FA7 236 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 FCRL4Q96PJ5 515 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 KCNC2Q96PR1 638 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 UBE2ZQ9H832 354 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 APOBEC3BQ9UH17 382 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TRIM64A6NGJ6 449 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 B4GALT2O60909 372 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TNFP01375 233 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ARAFP10398 606 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ATP5A1P25705 553 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 DNAJA1P31689 397 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ITGA1P56199 1179 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 DSTNP60981 165 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 RAB8AP61006 207 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ILF3Q12906 894 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 EPS8Q12929 822 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ZNF542PQ5EBM4 170 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TJAP1Q5JTD0 557 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TTC23Q5W5X9 447 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TSEN54Q7Z6J9 526 aaKnown RBP17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TRIM73Q86UV7 250 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 CYP4Z1Q86W10 505 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 PATE1Q8WXA2 126 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 NEUROD4Q9HD90 331 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 SLC2A4RGQ9NR83 387 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 THEGQ9P2T0 379 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 ASB4Q9Y574 426 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 SCN3AQ9NY46 2000 aa17.43■□□□□ 0.38
CCDC43-201ENST00000315286 TDRD6O60522 2096 aaKnown RBP17.42■□□□□ 0.38
CCDC43-201ENST00000315286 GLOD5A6NK44 160 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 TNFRSF1BP20333 461 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 CCR5P51681 352 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 ARHGDIAP52565 204 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 TUBA4AP68366 448 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 TDGQ13569 410 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 GPR18Q14330 331 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 CEACAM20Q6UY09 585 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 RBM44Q6ZP01 1051 aaKnown RBP17.42■□□□□ 0.38
CCDC43-201ENST00000315286 HORMAD2Q8N7B1 307 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 SPPL2AQ8TCT8 520 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 TSC22D3Q99576 134 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 GPR174Q9BXC1 333 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 GABARAPL1Q9H0R8 117 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 ACSS1Q9NUB1 689 aaPredicted RBP17.42■□□□□ 0.38
CCDC43-201ENST00000315286 C3orf18Q9UK00 162 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 PADI2Q9Y2J8 665 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 SAMHD1Q9Y3Z3 626 aaKnown RBP17.42■□□□□ 0.38
CCDC43-201ENST00000315286 ATG4BQ9Y4P1 393 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 CCDC88CQ9P219 2028 aa17.42■□□□□ 0.38
CCDC43-201ENST00000315286 A0A1W2PR48 441 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 ZW10O43264 779 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 MITFO75030 526 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 FPR1P21462 350 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 POLR2IP36954 125 aaKnown RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 PCBP3P57721 371 aaKnown RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 MRM1Q6IN84 353 aaKnown RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 TNFAIP8L2Q6P589 184 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-201ENST00000315286 C6orf120Q7Z4R8 191 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 VN1R4Q7Z5H5 301 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 SFTPA2Q8IWL1 248 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 ZNF555Q8NEP9 628 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 ZFP28Q8NHY6 868 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 GPBAR1Q8TDU6 330 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 SLC22A18Q96BI1 424 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 OR2A14Q96R47 310 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 FAIM2Q9BWQ8 316 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 REEP1Q9H902 201 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 SLC35C2Q9NQQ7 365 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 EHD3Q9NZN3 535 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 MAN2B1O00754 1011 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 TOR1BO14657 336 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 PGRMC2O15173 223 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 CERS1P27544 350 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 ELK4P28324 431 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 DAPP51397 102 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 KIR2DS3Q14952 304 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 SPDYE7PQ495Y7 208 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 CRB2Q5IJ48 1285 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 FBXO42Q6P3S6 717 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 SYT13Q7L8C5 426 aa17.41■□□□□ 0.38
CCDC43-201ENST00000315286 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms