RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 PNCKQ6P2M8 343 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 OR10G6Q8NH81 332 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 TAS1R2Q8TE23 839 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 THEM6Q8WUY1 208 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 PIGBQ92521 554 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 SH3YL1Q96HL8 342 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 FAM84BQ96KN1 310 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 CGRRF1Q99675 332 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 POLR2J2Q9GZM3 115 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 MSL2Q9HCI7 577 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 PLSCR3Q9NRY6 295 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 RYDENQ9NUL5 291 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 C14orf119Q9NWQ9 140 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 FAM120CQ9NX05 1096 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 OPTCQ9UBM4 332 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 A6NIZ1 184 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 J3QLW9 94 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 HAS3O00219 553 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 NOBOXO60393 691 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 CYP1A2P05177 515 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF19P17023 458 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 NDST2P52849 883 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 NCOA4Q13772 614 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 TESK1Q15569 626 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF697Q5TEC3 545 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 DCAF15Q66K64 600 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 GLT8D1Q68CQ7 371 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 SLC29A4Q7RTT9 530 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 C15orf54Q8N8G6 183 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 OR7G3Q8NG95 312 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 OR4D10Q8NGI6 311 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 OR1J4Q8NGS1 313 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 OR10AG1Q8NH19 301 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 SDR42E1Q8WUS8 393 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 TDRD3Q9H7E2 651 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 SRA1Q9HD15 236 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 GDAP2Q9NXN4 497 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 USP18Q9UMW8 372 aa7.38□□□□□ -1.23
LIMCH1-201ENST00000313860 UNCXA6NJT0 531 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 B4DGG1 531 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CLEC3AO75596 197 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CAPN15O75808 1086 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PTTG1O95997 202 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 EIF4EP06730 217 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FTH1P19P0C7X4 201 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 G6PDP11413 515 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF25P17030 456 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 COMTP21964 271 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PRKAA2P54646 552 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FXYD4P59646 89 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 P2RY14Q15391 338 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 UBE2SQ16763 222 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 DRICH1Q6PGQ1 229 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CHSY3Q70JA7 882 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TMEM173Q86WV6 379 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 OR51A7Q8NH64 312 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 MSI2Q96DH6 328 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PAGE5Q96GU1 130 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 MYO19Q96H55 970 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FAM234AQ9H0X4 552 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 NUMBLQ9Y6R0 609 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 A2MP01023 1474 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 A6NLC8 198 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RNF13O43567 381 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CTSSP25774 331 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 HLA-DMAP28067 261 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF143P52747 638 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CLTCL1P53675 1640 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RPP30P78346 268 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 KCNH2Q12809 1159 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 BEX5Q5H9J7 111 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TPRG1Q6ZUI0 275 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 GRASPQ7Z6J2 395 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 GCDHQ92947 438 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 SHDQ96IW2 340 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 C12orf57Q99622 126 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 GPR61Q9BZJ8 451 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 WDCPQ9H6R7 721 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 MRPS30Q9NP92 439 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ARL15Q9NXU5 204 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 DOK5Q9P104 306 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 SHANK2Q9UPX8 1470 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 A0A1B0GV72 72 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 A0A1W2PPW3 197 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PRPS1L1P21108 318 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CXCR1P25024 350 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 SCNN1AP37088 669 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CASP3P42574 277 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ETFDHQ16134 617 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 COQ5Q5HYK3 327 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 OR2B11Q5JQS5 317 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RAB41Q5JT25 222 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TMPPEQ6ZT21 453 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CMTM2Q8TAZ6 248 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 C10orf90Q96M02 699 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PRRC1Q96M27 445 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF714Q96N38 554 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms