RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TEKT2Q9UIF3 430 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 DOPEY2Q9Y3R5 2298 aa13.62□□□□□ -0.23
PPP1CA-201ENST00000312989 A0A0A6YYD5 115 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 MYOCOSA0A1B0GUC4 107 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 BLACEA4D250 179 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ASPDHA6ND91 283 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 TMPRSS11DO60235 418 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 FGF17O60258 216 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 EEDO75530 441 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 PRKRAO75569 313 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 LDLRP01130 860 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 SHBGP04278 402 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ARFIP1P53367 373 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 HNRNPH2P55795 449 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 DDX39BQ13838 428 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 OR1C1Q15619 314 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ZRSR2Q15696 482 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 CPSF6Q16630 551 aaKnown RBP eCLIP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 SPINK14Q6IE38 97 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 TAOK1Q7L7X3 1001 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 RPS19BP1Q86WX3 136 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 CYP4X1Q8N118 509 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 SLC5A8Q8N695 610 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF321PQ8N8H1 164 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 TRIM44Q96DX7 344 aaPredicted RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ROGDIQ9GZN7 287 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ABI3Q9P2A4 366 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 VTI1BQ9UEU0 232 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ADGRE2Q9UHX3 823 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ATG4BQ9Y4P1 393 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 ASB4Q9Y574 426 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 PCDHGA11Q9Y5H2 935 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 HIVEP3Q5T1R4 2406 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 SPTAN1Q13813 2472 aaKnown RBP13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 CNTRLQ7Z7A1 2325 aa13.61□□□□□ -0.23
PPP1CA-201ENST00000312989 WASHC1A8K0Z3 465 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 FOXO6A8MYZ6 492 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 LDB3O75112 727 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 DDAH2O95865 285 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 TNFRSF8P28908 595 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 TGM3Q08188 693 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 SLC13A2Q13183 592 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 CUL3Q13618 768 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 ELAVL1Q15717 326 aaKnown RBP13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF766Q5HY98 468 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 C18orf63Q68DL7 685 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 LETMD1Q6P1Q0 360 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 C16orf47Q6ZP98 133 aaPredicted RBP13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 DGAT2L6Q6ZPD8 337 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 CHSY3Q70JA7 882 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 BCORP1Q8N888 145 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 SRFBP1Q8NEF9 429 aaKnown RBP13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 PRR7Q8TB68 274 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 UCN3Q969E3 161 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 NCLNQ969V3 563 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 FRMD6Q96NE9 622 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 DDX31Q9H8H2 851 aaKnown RBP13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 ANKZF1Q9H8Y5 726 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 COPS7BQ9H9Q2 264 aaPredicted RBP13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 ADAP2Q9NPF8 381 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 OLAHQ9NV23 265 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 EMCNQ9ULC0 261 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 TMCO1Q9UM00 188 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 IKBKGQ9Y6K9 419 aa13.6□□□□□ -0.23
PPP1CA-201ENST00000312989 RP1L1Q8IWN7 2480 aaPredicted RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 TRBV11-1A0A0K0K1C0 115 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 CLDN4O14493 209 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 CDK2AP1O14519 115 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 DLX3O60479 287 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 ZNF354AO60765 605 aaPredicted RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 CLDN9O95484 217 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 SSR2P43308 183 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 CDH13P55290 713 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 ID2Q02363 134 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 SLAMF1Q13291 335 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 UNC50Q53HI1 259 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 MYLK4Q86YV6 388 aaPredicted RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 SIAH3Q8IW03 269 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 ARMC2Q8NEN0 867 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 OR4F6Q8NGB9 312 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 SSC4DQ8WTU2 575 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 RGMAQ96B86 450 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 MTBPQ96DY7 904 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 VMP1Q96GC9 406 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 TMEM237Q96Q45 408 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 ALOXE3Q9BYJ1 711 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 SEMA4BQ9NPR2 832 aaPredicted RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 PNO1Q9NRX1 252 aaKnown RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 FBXW2Q9UKT8 454 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 MRPS33Q9Y291 106 aaKnown RBP13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 ANGPTL3Q9Y5C1 460 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 SCN2AQ99250 2005 aa13.59□□□□□ -0.23
PPP1CA-201ENST00000312989 A0A1W2PR48 441 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms