RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ACOT8O14734 319 aa21.33■■□□□ 1
IRF3-201ENST00000309877 GALR3O60755 368 aaPredicted RBP21.33■■□□□ 1
IRF3-201ENST00000309877 BCAS2O75934 225 aaPredicted RBP21.33■■□□□ 1
IRF3-201ENST00000309877 ZNF883P0CG24 379 aa21.33■■□□□ 1
IRF3-201ENST00000309877 ZCCHC18P0CG32 403 aa21.33■■□□□ 1
IRF3-201ENST00000309877 CPN2P22792 545 aa21.33■■□□□ 1
IRF3-201ENST00000309877 TLX1P31314 330 aaPredicted RBP21.33■■□□□ 1
IRF3-201ENST00000309877 HBA1P69905 142 aa21.33■■□□□ 1
IRF3-201ENST00000309877 CCL7P80098 99 aa21.33■■□□□ 1
IRF3-201ENST00000309877 CCNIQ14094 377 aa21.33■■□□□ 1
IRF3-201ENST00000309877 PROX2Q3B8N5 592 aa21.33■■□□□ 1
IRF3-201ENST00000309877 TMTC4Q5T4D3 741 aa21.33■■□□□ 1
IRF3-201ENST00000309877 C18orf63Q68DL7 685 aa21.33■■□□□ 1
IRF3-201ENST00000309877 FAM180BQ6P0A1 224 aa21.33■■□□□ 1
IRF3-201ENST00000309877 PRR23CQ6ZRP0 262 aa21.33■■□□□ 1
IRF3-201ENST00000309877 KMT5CQ86Y97 462 aa21.33■■□□□ 1
IRF3-201ENST00000309877 GOT1L1Q8NHS2 421 aaPredicted RBP21.33■■□□□ 1
IRF3-201ENST00000309877 IFI44Q8TCB0 444 aa21.33■■□□□ 1
IRF3-201ENST00000309877 ZNF285Q96NJ3 590 aa21.33■■□□□ 1
IRF3-201ENST00000309877 PHF12Q96QT6 1004 aa21.33■■□□□ 1
IRF3-201ENST00000309877 MS4A12Q9NXJ0 267 aa21.33■■□□□ 1
IRF3-201ENST00000309877 ZNF282Q9UDV7 671 aaPredicted RBP21.33■■□□□ 1
IRF3-201ENST00000309877 ATXN7L1Q9ULK2 861 aaPredicted RBP21.33■■□□□ 1
IRF3-201ENST00000309877 ERVK-11Q9UQG0 969 aa21.33■■□□□ 1
IRF3-201ENST00000309877 SPACA6W5XKT8 324 aa21.33■■□□□ 1
IRF3-201ENST00000309877 ZNF860A6NHJ4 632 aa21.32■■□□□ 1
IRF3-201ENST00000309877 PRKRAO75569 313 aaKnown RBP21.32■■□□□ 1
IRF3-201ENST00000309877 CPNE6O95741 557 aa21.32■■□□□ 1
IRF3-201ENST00000309877 LMNAP02545 664 aaKnown RBP21.32■■□□□ 1
IRF3-201ENST00000309877 NR2F6P10588 404 aa21.32■■□□□ 1
IRF3-201ENST00000309877 MANFP55145 182 aaKnown RBP21.32■■□□□ 1
IRF3-201ENST00000309877 LIM2P55344 173 aa21.32■■□□□ 1
IRF3-201ENST00000309877 RUNX2Q13950 521 aa21.32■■□□□ 1
IRF3-201ENST00000309877 KCNAB1Q14722 419 aa21.32■■□□□ 1
IRF3-201ENST00000309877 INAVAQ3KP66 663 aa21.32■■□□□ 1
IRF3-201ENST00000309877 PRSS41Q7RTY9 318 aa21.32■■□□□ 1
IRF3-201ENST00000309877 TRIML2Q8N7C3 387 aa21.32■■□□□ 1
IRF3-201ENST00000309877 OR10A6Q8NH74 314 aa21.32■■□□□ 1
IRF3-201ENST00000309877 OR5P2Q8WZ92 322 aa21.32■■□□□ 1
IRF3-201ENST00000309877 LRRN3Q9H3W5 708 aa21.32■■□□□ 1
IRF3-201ENST00000309877 IKZF5Q9H5V7 419 aa21.32■■□□□ 1
IRF3-201ENST00000309877 SYNDIG1Q9H7V2 258 aa21.32■■□□□ 1
IRF3-201ENST00000309877 LYRM4Q9HD34 91 aa21.32■■□□□ 1
IRF3-201ENST00000309877 SLC35C2Q9NQQ7 365 aa21.32■■□□□ 1
IRF3-201ENST00000309877 TAS2R9Q9NYW1 312 aa21.32■■□□□ 1
IRF3-201ENST00000309877 PSME2Q9UL46 239 aa21.32■■□□□ 1
IRF3-201ENST00000309877 DAPP1Q9UN19 280 aa21.32■■□□□ 1
IRF3-201ENST00000309877 LAMA1P25391 3075 aa21.32■■□□□ 1
IRF3-201ENST00000309877 CLIC1O00299 241 aa21.31■■□□□ 1
IRF3-201ENST00000309877 PGRMC2O15173 223 aa21.31■■□□□ 1
IRF3-201ENST00000309877 CASC3O15234 703 aaKnown RBP21.31■■□□□ 1
IRF3-201ENST00000309877 ERAL1O75616 437 aaKnown RBP21.31■■□□□ 1
IRF3-201ENST00000309877 SKP1P63208 163 aa21.31■■□□□ 1
IRF3-201ENST00000309877 OLR1P78380 273 aa21.31■■□□□ 1
IRF3-201ENST00000309877 TNFRSF17Q02223 184 aa21.31■■□□□ 1
IRF3-201ENST00000309877 COL9A2Q14055 689 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 DHFR2Q86XF0 187 aa21.31■■□□□ 1
IRF3-201ENST00000309877 PDSS2Q86YH6 399 aa21.31■■□□□ 1
IRF3-201ENST00000309877 D2HGDHQ8N465 521 aa21.31■■□□□ 1
IRF3-201ENST00000309877 BHLHE22Q8NFJ8 381 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 SLC26A7Q8TE54 656 aa21.31■■□□□ 1
IRF3-201ENST00000309877 ZBED6CLQ96FA7 236 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 SLC41A2Q96JW4 573 aa21.31■■□□□ 1
IRF3-201ENST00000309877 BBS4Q96RK4 519 aa21.31■■□□□ 1
IRF3-201ENST00000309877 KCMF1Q9P0J7 381 aa21.31■■□□□ 1
IRF3-201ENST00000309877 EGFL7Q9UHF1 273 aa21.31■■□□□ 1
IRF3-201ENST00000309877 PCDHGB2Q9Y5G2 931 aa21.31■■□□□ 1
IRF3-201ENST00000309877 ARID1BQ8NFD5 2236 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 HYKKA2RU49 373 aa21.31■■□□□ 1
IRF3-201ENST00000309877 TOX3O15405 576 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 PSMG1O95456 288 aa21.31■■□□□ 1
IRF3-201ENST00000309877 PPIBP23284 216 aaKnown RBP21.31■■□□□ 1
IRF3-201ENST00000309877 NTSP30990 170 aa21.31■■□□□ 1
IRF3-201ENST00000309877 GRK6P43250 576 aa21.31■■□□□ 1
IRF3-201ENST00000309877 PCBP4P57723 403 aaKnown RBP21.31■■□□□ 1
IRF3-201ENST00000309877 GARNL3Q5VVW2 1013 aa21.31■■□□□ 1
IRF3-201ENST00000309877 NIPAL1Q6NVV3 410 aa21.31■■□□□ 1
IRF3-201ENST00000309877 SLC48A1Q6P1K1 146 aa21.31■■□□□ 1
IRF3-201ENST00000309877 ARHGEF39Q8N4T4 335 aa21.31■■□□□ 1
IRF3-201ENST00000309877 KLHL6Q8WZ60 621 aa21.31■■□□□ 1
IRF3-201ENST00000309877 FAM120BQ96EK7 910 aaKnown RBP21.31■■□□□ 1
IRF3-201ENST00000309877 LRGUKQ96M69 825 aa21.31■■□□□ 1
IRF3-201ENST00000309877 ZNF583Q96ND8 569 aa21.31■■□□□ 1
IRF3-201ENST00000309877 DPYSL5Q9BPU6 564 aa21.31■■□□□ 1
IRF3-201ENST00000309877 NPLQ9BXD5 320 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 SPRTNQ9H040 489 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 MUC13Q9H3R2 512 aa21.31■■□□□ 1
IRF3-201ENST00000309877 KAT8Q9H7Z6 458 aaKnown RBP21.31■■□□□ 1
IRF3-201ENST00000309877 TPT1P8Q9HAU6 139 aa21.31■■□□□ 1
IRF3-201ENST00000309877 ACSS1Q9NUB1 689 aaPredicted RBP21.31■■□□□ 1
IRF3-201ENST00000309877 GIMAP4Q9NUV9 329 aa21.31■■□□□ 1
IRF3-201ENST00000309877 ENTPD4Q9Y227 616 aa21.31■■□□□ 1
IRF3-201ENST00000309877 A0A1W2PQM1 296 aa21.3■■□□□ 1
IRF3-201ENST00000309877 LNP1A1A4G5 178 aa21.3■■□□□ 1
IRF3-201ENST00000309877 WASHC1A8K0Z3 465 aa21.3■■□□□ 1
IRF3-201ENST00000309877 TMEM150CB9EJG8 249 aa21.3■■□□□ 1
IRF3-201ENST00000309877 SGK494L7N484 410 aa21.3■■□□□ 1
IRF3-201ENST00000309877 KRT36O76013 467 aa21.3■■□□□ 1
IRF3-201ENST00000309877 RETP07949 1114 aa21.3■■□□□ 1
IRF3-201ENST00000309877 NELFEP18615 380 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms