RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 THOC6Q86W42 341 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 IQCF1Q8N6M8 205 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TSPEARQ8WU66 669 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 FCGR1BQ92637 280 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 PPCDCQ96CD2 204 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 MED28Q9H204 178 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SEMA3GQ9NS98 782 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 MYLKQ15746 1914 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 FEZF1A0PJY2 475 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TMEM189-UBE2V1I3L0A0 370 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SCO1O75880 301 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 F11P03951 625 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 ADH1AP07327 375 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 DNAJB1P25685 340 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 IRS1P35568 1242 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 PSMD8P48556 350 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 ATP12AP54707 1039 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SLAMF1Q13291 335 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 DPY19L1Q2PZI1 675 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TMEM31Q5JXX7 168 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TEX12Q9BXU0 123 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 POLR2J3Q9H1A7 115 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TRIOBPQ9H2D6 2365 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 SPAG17Q6Q759 2223 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 TEX46H3BTG2 121 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 POP4O95707 220 aaKnown RBP12.13□□□□□ -0.47
RETREG3-201ENST00000309428 EPHX1P07099 455 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 PPIGQ13427 754 aaKnown RBP eCLIP12.13□□□□□ -0.478e-8■□□□□ 10.3
RETREG3-201ENST00000309428 SLBPQ14493 270 aaKnown RBP eCLIP12.13□□□□□ -0.47
RETREG3-201ENST00000309428 IDNKQ5T6J7 187 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 NXNL2Q5VZ03 156 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 TRIM40Q6P9F5 258 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 TSPYL5Q86VY4 417 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-201ENST00000309428 LAX1Q8IWV1 398 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 GOLM1Q8NBJ4 401 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 SLC35B4Q969S0 331 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 CLIP3Q96DZ5 547 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 MCUBQ9NWR8 336 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 J3KTA2 159 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 PTTG1O95997 202 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 C8orf89P0DMQ9 161 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 NR2F1P10589 423 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 DCDC1P59894 354 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 PRSS36Q5K4E3 855 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 HIST2H2AA3Q6FI13 130 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 EFHD2Q96C19 240 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-201ENST00000309428 NLNQ9BYT8 704 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 RHBGQ9H310 441 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 AKIP1Q9NQ31 210 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 AP3M1Q9Y2T2 418 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 TRBC2A0A5B9 178 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 CHURC1-FNTBB4DL54 471 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 SLC28A2O43868 658 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 C6orf47O95873 294 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 RHOP08100 348 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 ZDHHC11BP0C7U3 371 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 CNR2P34972 360 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 PPP2R2BQ00005 443 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 MLLT1Q03111 559 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-201ENST00000309428 ZMAT1Q5H9K5 638 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 MTFR2Q6P444 385 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 LHFPL3Q86UP9 236 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 CHPFQ8IZ52 775 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 ZNF671Q8TAW3 534 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 CWH43Q9H720 699 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 ANKRA2Q9H9E1 313 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 TM7SF3Q9NS93 570 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 IL20RAQ9UHF4 553 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 PPT2Q9UMR5 302 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 ING4Q9UNL4 249 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
RETREG3-201ENST00000309428 PCM1Q15154 2024 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 RP1L1Q8IWN7 2480 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 A0A1W2PQL4 384 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ARHGEF33A8MVX0 844 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 GFRA2O00451 464 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 GRM6O15303 877 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 KCNK2O95069 426 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 HTR1AP08908 422 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 IL7P13232 177 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 B4GALNT1Q00973 533 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 GCNT6Q5T4J0 391 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 GTF2IRD2BQ6EKJ0 949 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 PNCKQ6P2M8 343 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 CHMP1BQ7LBR1 199 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 GTF2IRD2Q86UP8 949 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 VPS29Q9UBQ0 182 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms