RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 B3GALT4O96024 378 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 UMODP07911 640 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 C8orf89P0DMQ9 161 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 NR2F6P10588 404 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 AP2B1P63010 937 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 ZNF763Q0D2J5 394 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 CDC20Q12834 499 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 SERTAD2Q14140 314 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 HEPACAMQ14CZ8 416 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 SCIMPQ6UWF3 145 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 Q6ZSR9 355 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 IKBIPQ70UQ0 350 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 SAMD14Q8IZD0 417 aaPredicted RBP16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 APIPQ96GX9 242 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 CNTNAP3BQ96NU0 1288 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 MAPKAP1Q9BPZ7 522 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 SIKE1Q9BRV8 207 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 SORBS1Q9BX66 1292 aaKnown RBP16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 CNTNAP3Q9BZ76 1288 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 CCDC134Q9H6E4 229 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 RPF2Q9H7B2 306 aaKnown RBP16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 MEAF6Q9HAF1 191 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 PSME2Q9UL46 239 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 POLHQ9Y253 713 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 ASB4Q9Y574 426 aa16.86■□□□□ 0.29
SSSCA1-201ENST00000309328 C1orf226A1L170 272 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 SRRM3A6NNA2 597 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 TMPRSS11DO60235 418 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 CTNSO60931 367 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 SKAP2O75563 359 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 ANXA4P09525 319 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 DRD2P14416 443 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 ASMTP46597 345 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 RRADP55042 308 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 RHAGQ02094 409 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 BTKQ06187 659 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 PDCD2Q16342 344 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 OR52E8Q6IFG1 317 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 TMEM205Q6UW68 189 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 ATG14Q6ZNE5 492 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 ADAMTS17Q8TE56 1095 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 TUBGCP3Q96CW5 907 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 FCRL1Q96LA6 429 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 FER1L6-AS2Q96M78 137 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 PELOQ9BRX2 385 aaKnown RBP16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 ZNF395Q9H8N7 513 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 PRTFDC1Q9NRG1 225 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 EHD3Q9NZN3 535 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 FBXW2Q9UKT8 454 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 MAPRE3Q9UPY8 281 aa16.85■□□□□ 0.29
SSSCA1-201ENST00000309328 CFAP47Q6ZTR5 3102 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 LOC102723996A0A087X1L8 192 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 B4GALT2O60909 372 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 ATXN8OSP0DMR3 200 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 RPS18P62269 152 aaKnown RBP16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 SLC13A2Q13183 592 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 IL10RAQ13651 578 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 ERV3-1Q14264 604 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 KIAA0040Q15053 153 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 TERF2Q15554 542 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 NSDHLQ15738 373 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 NOXRED1Q6NXP6 359 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 MRGPREQ86SM8 312 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 SCUBE1Q8IWY4 988 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 PRSS58Q8IYP2 241 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 TMEM102Q8N9M5 508 aaPredicted RBP16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 STON2Q8WXE9 905 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 PTCHD1Q96NR3 888 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 PNPOQ9NVS9 261 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 EIF3LQ9Y262 564 aaKnown RBP16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 ATG4BQ9Y4P1 393 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 MRPS18BQ9Y676 258 aaKnown RBP16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 CELSR3Q9NYQ7 3312 aa16.84■□□□□ 0.29
SSSCA1-201ENST00000309328 KLHL41O60662 606 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 CDC123O75794 336 aaPredicted RBP16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 ITGB2P05107 769 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 PRPS2P11908 318 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 ICAM2P13598 275 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 OTX2P32243 289 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 MDH1P40925 334 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 HNRNPH2P55795 449 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 RPL38P63173 70 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 STX4Q12846 297 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 ST3GAL2Q16842 350 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 GALNTL6Q49A17 601 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 NDUFAF5Q5TEU4 345 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 LAPTM4BQ86VI4 370 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 TMEM132CQ8N3T6 1108 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 FAM47BQ8NA70 645 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 FNDC5Q8NAU1 212 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 OR2T11Q8NH01 316 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 ZNF764Q96H86 408 aaPredicted RBP16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 NUF2Q9BZD4 464 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 MYNNQ9NPC7 610 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 ASIC5Q9NY37 505 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 NOP53Q9NZM5 478 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 HS3ST3B1Q9Y662 390 aa16.83■□□□□ 0.28
SSSCA1-201ENST00000309328 IGKV3D-11A0A0A0MRZ8 115 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 A0A1W2PR48 441 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 TCRBV16S1A1N1A0A5B0 115 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms