RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GAREM1Q9H706 876 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ASIC5Q9NY37 505 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 WIF1Q9Y5W5 379 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TIPRLO75663 272 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ACRV1P26436 265 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 EPHA3P29320 983 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 THBS2P35442 1172 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ITPK1Q13572 414 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 GLT8D1Q68CQ7 371 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 HMBOX1Q6NT76 420 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 C19orf35Q6ZS72 473 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SKA3Q8IX90 412 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 DPEP3Q9H4B8 488 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TMEM38AQ9H6F2 299 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 AMD1P17707 334 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 MASP1P48740 699 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 FBXL6Q8N531 539 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ACBD7Q8N6N7 88 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ZNF764Q96H86 408 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 SNX18Q96RF0 628 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 GREB1LQ9C091 1923 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 ACOT7O00154 380 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TNFRSF21O75509 655 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SNAPINO95295 136 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SERPIND1P05546 499 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CCKBRP32239 447 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 VASPP50552 380 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 MCCD1P59942 119 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 EEF1A1P68104 462 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 EEF1A2Q05639 463 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 ELOCQ15369 112 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ALFQ53S48 1182 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ALG10BQ5I7T1 473 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 EEF1A1P5Q5VTE0 462 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 FOXR1Q6PIV2 292 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 BLOC1S3Q6QNY0 202 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 OR10H5Q8NGA6 315 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 OR6T1Q8NGN1 323 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 OR5P2Q8WZ92 322 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 REEP4Q9H6H4 257 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ZNF107Q9UII5 783 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 GMEB2Q9UKD1 530 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ABCG2Q9UNQ0 655 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CLCA3PQ9Y6N3 262 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CNTRLQ7Z7A1 2325 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 RAD51DO75771 328 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 GLULP15104 373 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TGFBR3Q03167 851 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CNKSR3Q6P9H4 555 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CAMKMTQ7Z624 323 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ECHDC2Q86YB7 292 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 NEIL3Q8TAT5 605 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SHKBP1Q8TBC3 707 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ZC3H10Q96K80 434 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 ARL5BQ96KC2 179 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 USB1Q9BQ65 265 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 TBL1XR1Q9BZK7 514 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 MTHFD2LQ9H903 347 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 BTNL2Q9UIR0 455 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 XIRP1Q702N8 1843 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 ENDOD1O94919 500 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 LINGO3P0C6S8 592 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CD1EP15812 388 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 NCS1P62166 190 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CXCL9Q07325 125 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SF3A2Q15428 464 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 FRRS1Q6ZNA5 592 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 OR9A1PQ8NGU1 263 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CRYGNQ8WXF5 182 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 XPNPEP1Q9NQW7 623 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 GRHPRQ9UBQ7 328 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 FLRT2O43155 660 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 NADKO95544 446 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 KCNA10Q16322 511 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 OGFRL1Q5TC84 451 aaPredicted RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 KCTD8Q6ZWB6 473 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 PLXDC1Q8IUK5 500 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 OR2AJ1Q8NGZ0 328 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TRMT10AQ8TBZ6 339 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 C22orf15Q8WYQ4 148 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 PYCR2Q96C36 320 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 PIP5K1AQ99755 562 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 DCSTAMPQ9H295 470 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TPT1P8Q9HAU6 139 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CSNK1G1Q9HCP0 422 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SLCO1B3Q9NPD5 702 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 MMACHCQ9Y4U1 282 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 PLOD3O60568 738 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 FKTNO75072 461 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 MBP02144 154 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 FEN1P39748 380 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 LLGL1Q15334 1064 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 HENMT1Q5T8I9 393 aaKnown RBP3.87□□□□□ -1.79
USH2A-201ENST00000307340 OLFML2AQ68BL7 652 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 CEP97Q8IW35 865 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 ADAM2Q99965 735 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 SRRDQ9UH36 339 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 FRMPD3Q5JV73 1810 aa3.87□□□□□ -1.79
USH2A-201ENST00000307340 TPST1O60507 370 aa3.86□□□□□ -1.79
USH2A-201ENST00000307340 C5AR1P21730 350 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms