RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 HTATIP2Q9BUP3 242 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SRRQ9GZT4 340 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 MRPL39Q9NYK5 338 aaKnown RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF670-ZNF695F2Z2N8 137 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 PRMT3O60678 531 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 BCHEP06276 602 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 RAB8AP61006 207 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 BCDIN3DQ7Z5W3 292 aaKnown RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 PDZD3Q86UT5 571 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 COMMD7Q86VX2 200 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 OXR1Q8N573 874 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 GALNT11Q8NCW6 608 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 REPS1Q96D71 796 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 PDLIM5Q96HC4 596 aaKnown RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 C2orf49Q9BVC5 232 aaPredicted RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 PHF11Q9UIL8 331 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SCN4AP35499 1836 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 A0A1W2PRB8 838 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 HPGDSO60760 199 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 RFPL3O75679 317 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 RAB36O95755 333 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 TGFB1P01137 390 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 ACPPP15309 386 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 CBLP22681 906 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 POU6F2P78424 691 aaPredicted RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 ASAH1Q13510 395 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 EFR3AQ14156 821 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 KIAA0040Q15053 153 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SLC35F1Q5T1Q4 408 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 SHFQ7M4L6 423 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 CELF5Q8N6W0 485 aaKnown RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 FUBP3Q96I24 572 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 LRR1Q96L50 414 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 GABARAPL3Q9BY60 117 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 ENAMQ9NRM1 1142 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
TRIM35-201ENST00000305364 NINQ8N4C6 2090 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 CEP290O15078 2479 aa12.49□□□□□ -0.41
TRIM35-201ENST00000305364 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 HCN1O60741 890 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 CSF3P09919 207 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 SLC6A4P31645 630 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 GINS1Q14691 196 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 DUSP7Q16829 419 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 YIF1BQ5BJH7 314 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 SAXO2Q658L1 398 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KIAA1161Q6NSJ0 714 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 CREB3L2Q70SY1 520 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KLHDC9Q8NEP7 349 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ZIC5Q96T25 663 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 NIPAL2Q9H841 368 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ATP13A2Q9NQ11 1180 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KLHL21Q9UJP4 597 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 FABP7O15540 132 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KIR2DL3P43628 341 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 HNMTP50135 292 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 DSTNP60981 165 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 GARNL3Q5VVW2 1013 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 PMEPA1Q969W9 287 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF607Q96SK3 696 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 GTPBP2Q9BX10 602 aaKnown RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ENPP4Q9Y6X5 453 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ERVH48-1M5A8F1 160 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 CSO75390 466 aaKnown RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 CH25HO95992 272 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ANXA3P12429 323 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ARSBP15848 533 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ETV6P41212 452 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 FAM180BQ6P0A1 224 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 CEACAM20Q6UY09 585 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 NXPE1Q8N323 547 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ASZ1Q8WWH4 475 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 TXNL4BQ9NX01 149 aaKnown RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 PPIEQ9UNP9 301 aaKnown RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 BAIAP2Q9UQB8 552 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 WDR81Q562E7 1941 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 GABRR3A8MPY1 467 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 H0YC42 278 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 PGRMC2O15173 223 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 GASTP01350 101 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 C1QBP02746 253 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 PCGF2P35227 344 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KCNJ10P78508 379 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 RHAGQ02094 409 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF91Q05481 1191 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 KRT33BQ14525 404 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF630Q2M218 657 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms