RNA–Protein interactions for RNA: ENST00000304858.6

HSPA4-201, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA4, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-201ENST00000304858 CYBRD1Q53TN4 286 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RBM48Q5RL73 367 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 CXXC5Q7LFL8 322 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TMEM102Q8N9M5 508 aaPredicted RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 S100ZQ8WXG8 99 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RHBDF1Q96CC6 855 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 WDR12Q9GZL7 423 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 ERVK-18Q9QC07 812 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 UTS2RQ9UKP6 389 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 ST14Q9Y5Y6 855 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 LOC110117498-PIK3R3F6TDL0 507 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 PRAMEF26H0Y7S4 382 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 BCHEP06276 602 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 NR2C1P13056 603 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 SELENOVP59797 346 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 FGL2Q14314 439 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 PLEKHS1Q5SXH7 462 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RNF130Q86XS8 419 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 ZNF597Q96LX8 424 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 PRTFDC1Q9NRG1 225 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 PTBP2Q9UKA9 531 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TRBC2A0A5B9 178 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 WASHC1A8K0Z3 465 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 WASH3PC4AMC7 463 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RTCAO00442 366 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 PCDHGA12O60330 932 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 SNX4O95219 450 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 PRAMEF12O95522 483 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 ADRB3P13945 408 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 NUDT1P36639 197 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 CDK6Q00534 326 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 WASH2PQ6VEQ5 465 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 OR2AJ1Q8NGZ0 328 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TP53INP1Q96A56 240 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TOE1Q96GM8 510 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 ARMC1Q9NVT9 282 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 DKKL1Q9UK85 242 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 A0A1B0GTL3 188 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 CER1O95813 267 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 LAMP1P11279 417 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 MTHFD2P13995 350 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 FPR1P21462 350 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 IL12AP29459 219 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 KDELR2P33947 212 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RAB28P51157 221 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RPS3AP61247 264 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 RPS26P62854 115 aaKnown RBP11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TARDBPQ13148 414 aaKnown RBP eCLIP11.62□□□□□ -0.554e-7■■■□□ 16.7
HSPA4-201ENST00000304858 SP140Q13342 867 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 TIGD6Q17RP2 521 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 MANEALQ5VSG8 457 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 ZZZ3Q8IYH5 903 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 OR4C6Q8NH72 309 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 MS4A12Q9NXJ0 267 aa11.62□□□□□ -0.55
HSPA4-201ENST00000304858 NPPAP01160 153 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 MYL9P24844 172 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 HOXC13P31276 330 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 CAMK1Q14012 370 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 VMACQ2NL98 169 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ZNF311Q5JNZ3 666 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 TMEM236Q5W0B7 351 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ENKURQ8TC29 256 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 TFAP2CQ92754 450 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ZNF717Q9BY31 904 aaPredicted RBP11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ANKRD60Q9BZ19 345 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 MARCH5Q9NX47 278 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SPATA7Q9P0W8 599 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SMIM30A4D0T7 59 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ZNF860A6NHJ4 632 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 FAM227AF5H4B4 570 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 NME6O75414 186 aaPredicted RBP11.61□□□□□ -0.55
HSPA4-201ENST00000304858 GGT1P19440 569 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 FBLP22087 321 aaKnown RBP11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SMU1Q2TAY7 513 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 TAMM41Q96BW9 452 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 EPYCQ99645 322 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 AGPAT4Q9NRZ5 378 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ASB1Q9Y576 335 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 LINC01553A4QN01 128 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 BTN3A3O00478 584 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SLC16A8O95907 504 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 HBQ1P09105 142 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ZNF26P17031 533 aaPredicted RBP11.61□□□□□ -0.55
HSPA4-201ENST00000304858 DNASE1L1P49184 302 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SPINT3P49223 89 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 ACY1Q03154 408 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 MGAT3Q09327 533 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 GRIK2Q13002 908 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 TYSND1Q2T9J0 566 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 CEACAM20Q6UY09 585 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 AMIGO1Q86WK6 493 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 PHOSPHO1Q8TCT1 267 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SNX33Q8WV41 574 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 DAZLQ92904 295 aaKnown RBP11.61□□□□□ -0.55
HSPA4-201ENST00000304858 TMEM203Q969S6 136 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 WBP2Q969T9 261 aa11.61□□□□□ -0.55
HSPA4-201ENST00000304858 SCRN2Q96FV2 425 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms