RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SLC5A12Q1EHB4 618 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 GALNT10Q86SR1 603 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ZDHHC13Q8IUH4 622 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 MAGEE2Q8TD90 523 aaPredicted RBP13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ORAI3Q9BRQ5 295 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 ROGDIQ9GZN7 287 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 MAGIXQ9H6Y5 334 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 TM9SF3Q9HD45 589 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 DNAJB9Q9UBS3 223 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
SHCBP1-201ENST00000303383 OR2A25A4D2G3 310 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 TMEM247A6NEH6 219 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 C5orf58C9J3I9 102 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 ZNF888P0CJ79 500 aaPredicted RBP13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 ADPRMQ3LIE5 342 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 STK32CQ86UX6 486 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 IQCHQ86VS3 1027 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 PTOV1Q86YD1 416 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 MAGED4Q96JG8 741 aa13.77□□□□□ -0.2
SHCBP1-201ENST00000303383 C10orf142B7Z368 130 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 EI24O14681 340 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 WNT1P04628 370 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 NME1P15531 152 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 TSFMP43897 325 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 NCBP2P52298 156 aaKnown RBP eCLIP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 MAZP56270 477 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 HNRNPKP61978 463 aaKnown RBP eCLIP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 COX20Q5RI15 118 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 ZDHHC21Q8IVQ6 265 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC44A2Q8IWA5 706 aaPredicted RBP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC38A3Q99624 504 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 CXorf36Q9H7Y0 433 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 SLC35C2Q9NQQ7 365 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 GPR27Q9NS67 375 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 LYARQ9NX58 379 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 DLGAP2Q9P1A6 1054 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 ANKMY1Q9P2S6 941 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 SUV39H1O43463 412 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 TBX19O60806 448 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 ARFIP1P53367 373 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 SCARB2Q14108 478 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 FBXO42Q6P3S6 717 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 TMBIM1Q969X1 311 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 ZNF597Q96LX8 424 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 OLAHQ9NV23 265 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 EHD3Q9NZN3 535 aa13.77□□□□□ -0.21
SHCBP1-201ENST00000303383 BUD31P41223 144 aaPredicted RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 HYAL2Q12891 473 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 C16orf72Q14CZ0 275 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 PRSS53Q2L4Q9 553 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ABHD13Q7L211 337 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 VN1R4Q7Z5H5 301 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ZCCHC7Q8N3Z6 543 aaKnown RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CYGBQ8WWM9 190 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 LZICQ8WZA0 190 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ANGPT4Q9Y264 503 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ATG4BQ9Y4P1 393 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 PLXND1Q9Y4D7 1925 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 OR5K3A6NET4 321 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 MYO1GB0I1T2 1018 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 DENRO43583 198 aaKnown RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 PRKRAO75569 313 aaKnown RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CAPNS1P04632 268 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 PCGF2P35227 344 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CSNK1EP49674 416 aaKnown RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ARHGDIAP52565 204 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 DSTNP60981 165 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 RBBP4Q09028 425 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 BLMHQ13867 455 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 DEFB134Q4QY38 66 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 WDR45BQ5MNZ6 344 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 NFKBIDQ8NI38 313 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 TMEM121BQ9BXQ6 578 aaPredicted RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 AICDAQ9GZX7 198 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 SCN3AQ9NY46 2000 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 TNFSF14O43557 240 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 B3GALT2O43825 422 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CTSVO60911 334 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 SDC3O75056 442 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 IFNA14P01570 189 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 LYNP07948 512 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 TLX1P31314 330 aaPredicted RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CCT3P49368 545 aaKnown RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 TNFAIP8L2Q6P589 184 aaPredicted RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 RSC1A1Q92681 617 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 CLDN23Q96B33 292 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 RUBCNLQ9H714 662 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 SEMA3GQ9NS98 782 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 ACSS1Q9NUB1 689 aaPredicted RBP13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 SPACA6W5XKT8 324 aa13.76□□□□□ -0.21
SHCBP1-201ENST00000303383 A0A1W2PR77 199 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 C7orf72A4D263 438 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 G3V2T6 193 aa13.75□□□□□ -0.21
SHCBP1-201ENST00000303383 RASAL1O95294 804 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms