RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 UBALD2Q8IYN6 164 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 OR4N4Q8N0Y3 316 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 C11orf65Q8NCR3 313 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 UTP15Q8TED0 518 aaKnown RBP21.14■□□□□ 0.97
SMAD1-201ENST00000302085 OSBPL11Q9BXB4 747 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 SIRT3Q9NTG7 399 aaPredicted RBP21.14■□□□□ 0.97
SMAD1-201ENST00000302085 SIT1Q9Y3P8 196 aa21.14■□□□□ 0.97
SMAD1-201ENST00000302085 P2RX6O15547 441 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 CST1P01037 141 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 ZNF888P0CJ79 500 aaPredicted RBP21.13■□□□□ 0.97
SMAD1-201ENST00000302085 CRYBA2P53672 197 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 PPP1CAP62136 330 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 RGS1Q08116 209 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 FADDQ13158 208 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 GK3PQ14409 553 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 GCNT6Q5T4J0 391 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 TMEM214Q6NUQ4 689 aaKnown RBP21.13■□□□□ 0.97
SMAD1-201ENST00000302085 CBLL1Q75N03 491 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 ZNF438Q7Z4V0 828 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 RBM12BQ8IXT5 1001 aaKnown RBP21.13■□□□□ 0.97
SMAD1-201ENST00000302085 ABCA7Q8IZY2 2146 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 BAHD1Q8TBE0 780 aaPredicted RBP21.13■□□□□ 0.97
SMAD1-201ENST00000302085 TMBIM1Q969X1 311 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 GAL3ST3Q96A11 431 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 NLNQ9BYT8 704 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 ASPSCR1Q9BZE9 553 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 BATF3Q9NR55 127 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 ACSS1Q9NUB1 689 aaPredicted RBP21.13■□□□□ 0.97
SMAD1-201ENST00000302085 RPS6KA6Q9UK32 745 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 PCDHGB5Q9Y5G0 923 aa21.13■□□□□ 0.97
SMAD1-201ENST00000302085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 ZNF23P17027 643 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 MAZP56270 477 aaKnown RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 MRPS35P82673 323 aaKnown RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 RELAQ04206 551 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 EEF1A2Q05639 463 aaKnown RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 TGM3Q08188 693 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 VAC14Q08AM6 782 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 HSPB3Q12988 150 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 ELOCQ15369 112 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 C18orf63Q68DL7 685 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 FRMPD2BQ6IN97 320 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 TMEM154Q6P9G4 183 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 EIF3MQ7L2H7 374 aaKnown RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 TMEFF1Q8IYR6 380 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 LMX1AQ8TE12 382 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 THAP11Q96EK4 314 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 ZBED6CLQ96FA7 236 aaPredicted RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SLC35C2Q9NQQ7 365 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 C8orf4Q9NR00 106 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 A0A0J9YY10 115 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 OR5K3A6NET4 321 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 EI24O14681 340 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 PROM1O43490 865 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SH3BP5O60239 455 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 B4GALT2O60909 372 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 GUCY1B2O75343 617 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 FKBP9O95302 570 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 AIFM1O95831 613 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SMIM10L1P0DMW3 83 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 HOXB6P17509 224 aaKnown RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 TYRP1P17643 537 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 CDK9P50750 372 aaKnown RBP21.12■□□□□ 0.97
SMAD1-201ENST00000302085 DMWDQ09019 674 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SPIDRQ14159 915 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SAXO2Q658L1 398 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 NEURL3Q96EH8 262 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SMIM10Q96HG1 83 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 CNBD2Q96M20 576 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 RAD21L1Q9H4I0 556 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 TMEM38AQ9H6F2 299 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 CES1P1Q9UKY3 287 aa21.12■□□□□ 0.97
SMAD1-201ENST00000302085 SEMG1P04279 462 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 PRIM2P49643 509 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 MLC1Q15049 377 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.11■□□□□ 0.97
SMAD1-201ENST00000302085 VTCN1Q7Z7D3 282 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 PSMA8Q8TAA3 256 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 RSC1A1Q92681 617 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 SPACA7Q96KW9 195 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 AMDHD1Q96NU7 426 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 MAPKAP1Q9BPZ7 522 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 GLIPR2Q9H4G4 154 aa21.11■□□□□ 0.97
SMAD1-201ENST00000302085 TMEM229AB2RXF0 380 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 H0YGG7 62 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 SLC35G6P0C7Q6 338 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 AQP1P29972 269 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 MAGEA2P43356 314 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 IST1P53990 364 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 NXPH1P58417 271 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 ARF3P61204 181 aaPredicted RBP21.1■□□□□ 0.97
SMAD1-201ENST00000302085 RBBP4Q09028 425 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 SLC36A4Q6YBV0 504 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 OOSP2Q86WS3 158 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 GKN2Q86XP6 184 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 CHERPQ8IWX8 916 aaKnown RBP21.1■□□□□ 0.97
SMAD1-201ENST00000302085 ARL14Q8N4G2 192 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 NFKBIDQ8NI38 313 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 ZFYVE21Q9BQ24 234 aa21.1■□□□□ 0.97
SMAD1-201ENST00000302085 NEUROD4Q9HD90 331 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms