RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ACSL6Q9UKU0 697 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 HCN2Q9UL51 889 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 ZNF670-ZNF695F2Z2N8 137 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 NPPAP01160 153 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 LPLP06858 475 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 CD3GP09693 182 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 STOMP27105 288 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 GJA5P36382 358 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 STC1P52823 247 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 RPS14P62263 151 aaKnown RBP13.8□□□□□ -0.2
CDT1-201ENST00000301019 DUSP6Q16828 381 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 LBX2Q6XYB7 198 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 MDGA1Q8NFP4 955 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 SLC25A46Q96AG3 418 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
CDT1-201ENST00000301019 CDKN2AIPNLQ96HQ2 116 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 NPAS1Q99742 590 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 GPR52Q9Y2T5 361 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 MAB21L2Q9Y586 359 aa13.8□□□□□ -0.2
CDT1-201ENST00000301019 RGS14O43566 566 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 KCNK5O95279 499 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 TPOP07202 933 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 HLA-EP13747 358 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 GIFP27352 417 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 ATP12AP54707 1039 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ARMCX2Q7L311 632 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 SLC16A13Q7RTY0 426 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ZNF527Q8NB42 609 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 GPR137Q96N19 417 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 NUSAP1Q9BXS6 441 aaKnown RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 ARNT2Q9HBZ2 717 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 EXTL2Q9UBQ6 330 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 FKBPLQ9UIM3 349 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ADAM30Q9UKF2 790 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 STUB1Q9UNE7 303 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 TLX2O43763 284 aaPredicted RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 PCDH7O60245 1069 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 IL6P05231 212 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 JUPP14923 745 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 CLDN20P56880 219 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 COX10Q12887 443 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 SLC14A2Q15849 920 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 TMEM91Q6ZNR0 172 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 NLRC3Q7RTR2 1065 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 SELENOMQ8WWX9 145 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 GCDHQ92947 438 aaPredicted RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 TNIP3Q96KP6 325 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 MAGIXQ9H6Y5 334 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 SLC22A11Q9NSA0 550 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 FLVCR2Q9UPI3 526 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 PCDHGA2Q9Y5H1 932 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 FAM220BPB1ANY3 271 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 SGTAO43765 313 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 GASTP01350 101 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ANXA3P12429 323 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ETFDHQ16134 617 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 CXorf57Q6NSI4 855 aaKnown RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 TMEM151BQ8IW70 566 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
CDT1-201ENST00000301019 RHEBL1Q8TAI7 183 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 NT5C3BQ969T7 300 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 MYLPFQ96A32 169 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 APIPQ96GX9 242 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 SFXN2Q96NB2 322 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 GPR20Q99678 358 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 SPON2Q9BUD6 331 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 ACTR6Q9GZN1 396 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 DPP7Q9UHL4 492 aa13.79□□□□□ -0.2
CDT1-201ENST00000301019 OR5K4A6NMS3 321 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 GMDSO60547 372 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 CHMP24386 653 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 HAAOP46952 286 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 RBMS2Q15434 407 aaKnown RBP13.78□□□□□ -0.2
CDT1-201ENST00000301019 FAHD1Q6P587 224 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 ESPNLQ6ZVH7 1005 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 OR8K5Q8NH50 307 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 MOSPD2Q8NHP6 518 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 C11orf24Q96F05 449 aaPredicted RBP13.78□□□□□ -0.2
CDT1-201ENST00000301019 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 PPP3R2Q96LZ3 170 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 TMEM245Q9H330 911 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 CRTAC1Q9NQ79 661 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 PRDM9Q9NQV7 894 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 KCTD5Q9NXV2 234 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 ERVW-1Q9UQF0 538 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 IRAK3Q9Y616 596 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 TEX13CA0A0J9YWL9 993 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 PDCD5O14737 125 aa13.78□□□□□ -0.2
CDT1-201ENST00000301019 CELF2O95319 508 aaKnown RBP13.78□□□□□ -0.2
CDT1-201ENST00000301019 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms