RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SERPINB10P48595 397 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 DCP2Q8IU60 420 aaKnown RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 INSM2Q96T92 566 aaPredicted RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 RBM4BQ9BQ04 359 aaKnown RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 RBM4Q9BWF3 364 aaKnown RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 OBP2AQ9NY56 170 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 CA5BQ9Y2D0 317 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 ZNF451Q9Y4E5 1061 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 A0A1W2PQU0 124 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 PLPP1O14494 284 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 EPHA2P29317 976 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 RPS26P62854 115 aaKnown RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 MLF2Q15773 248 aaPredicted RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 UNC5DQ6UXZ4 953 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 P2RY8Q86VZ1 359 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 ARMC8Q8IUR7 673 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 SYNPOQ8N3V7 929 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 AMER3Q8N944 861 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 SLC6A16Q9GZN6 736 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 MAGIXQ9H6Y5 334 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 BTNL2Q9UIR0 455 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 HPRP00739 348 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 HOXB3P14651 431 aaPredicted RBP20.91■□□□□ 0.94
TPM4-201ENST00000300933 CD40LGP29965 261 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 PTGER1P34995 402 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 ATAT1Q5SQI0 421 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 OR2T5Q6IEZ7 315 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 AKAP14Q86UN6 197 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 OR2T29Q8NH02 315 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 FBXO8Q9NRD0 319 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 GPSM3Q9Y4H4 160 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 SNX11Q9Y5W9 270 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 SNRNP200O75643 2136 aaKnown RBP20.91■□□□□ 0.94
TPM4-201ENST00000300933 ANKDD1BA6NHY2 528 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 LCMT2O60294 686 aaKnown RBP20.91■□□□□ 0.94
TPM4-201ENST00000300933 ANGPTL1O95841 491 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 DLGAP3O95886 979 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 MVDP53602 400 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 RAPSNQ13702 412 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 SLC5A12Q1EHB4 618 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 ANKRD54Q6NXT1 300 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 RNF130Q86XS8 419 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 METTL4Q8N3J2 472 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 ASPSCR1Q9BZE9 553 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 RIBC2Q9H4K1 309 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 KLHL20Q9Y2M5 609 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3DA0A087WVF3 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3IA0A087WXS9 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3EA0A087X179 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3KA0A087X1G2 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3FA6NER0 549 aaPredicted RBP20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3LB9A6J9 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 FABP3P05413 133 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3HP0C7X1 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 CDK5R2Q13319 367 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 SGCGQ13326 291 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 ANXA8L1Q5VT79 327 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3GQ6DHY5 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 FAM71E1Q6IPT2 247 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3CQ6IPX1 549 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 ADGRF3Q8IZF5 1079 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 TBC1D3Q8IZP1 549 aaPredicted RBP20.91■□□□□ 0.94
TPM4-201ENST00000300933 SVOPLQ8N434 492 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 DYNC2LI1Q8TCX1 351 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 MENTQ9BUN1 341 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 CHST8Q9H2A9 424 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 MIEF1Q9NQG6 463 aa20.91■□□□□ 0.94
TPM4-201ENST00000300933 PDP1Q9P0J1 537 aaPredicted RBP20.91■□□□□ 0.94
TPM4-201ENST00000300933 FADS2O95864 444 aaKnown RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 KIR2DL1P43626 348 aaPredicted RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 DAPP51397 102 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 C21orf58P58505 322 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 CLCA4Q14CN2 919 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 NPTX1Q15818 432 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 TEX101Q9BY14 249 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 PRDM8Q9NQV8 689 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 SAMHD1Q9Y3Z3 626 aaKnown RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 A0A1W2PPV9 198 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 RNASET2O00584 256 aaKnown RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 TBX1O43435 398 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 OR1F1O43749 312 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 HNRNPFP52597 415 aaKnown RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 CLDN2P57739 230 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 IFITM2Q01629 132 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 TOP3AQ13472 1001 aaPredicted RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 TMEM196Q5HYL7 178 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 ZNF691Q5VV52 312 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 LCTLQ6UWM7 567 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 CBLL1Q75N03 491 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 SLC9B2Q86UD5 537 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 KIAA1958Q8N8K9 716 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 OR52J3Q8NH60 311 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 NFKBIDQ8NI38 313 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 SPPL2AQ8TCT8 520 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 SETD7Q8WTS6 366 aaKnown RBP20.9■□□□□ 0.94
TPM4-201ENST00000300933 DZANK1Q9NVP4 752 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 TAAR2Q9P1P5 351 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 ATP6V1HQ9UI12 483 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 LAMA1P25391 3075 aa20.9■□□□□ 0.94
TPM4-201ENST00000300933 TRBV23OR9-2A0A075B6M9 112 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms