RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZFP28Q8NHY6 868 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 ZCCHC10Q8TBK6 192 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 TCTN2Q96GX1 697 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SMIM10Q96HG1 83 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SLC35C2Q9NQQ7 365 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 C5AR2Q9P296 337 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 LRIT1Q9P2V4 623 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 PILRBQ9UKJ0 227 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 PSME2Q9UL46 239 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SNX8Q9Y5X2 465 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 KNL1Q8NG31 2342 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 TXNDC9O14530 226 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 PROM1O43490 865 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 NUDT21O43809 227 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 AIFM1O95831 613 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 HOXB6P17509 224 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 ALOX12P18054 663 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 FASP25445 335 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 BUD31P41223 144 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 CRATP43155 626 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 VAC14Q08AM6 782 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 BNIP3Q12983 259 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 DEFB134Q4QY38 66 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 IZUMO2Q6UXV1 221 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 ZZZ3Q8IYH5 903 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 CLEC4FQ8N1N0 589 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SLC25A45Q8N413 288 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 BBS4Q96RK4 519 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SEPHS2Q99611 448 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 RAB33BQ9H082 229 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 VCXQ9H320 206 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 YY1AP1Q9H869 796 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 TMEM74BQ9NUR3 256 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 GIMAP4Q9NUV9 329 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 DCAF13Q9NV06 445 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 DNAAF2Q9NVR5 837 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 MS4A12Q9NXJ0 267 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SLC9B1P1A6NJY1 282 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 NR2F6P10588 404 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 VSX2P58304 361 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 CHRNB3Q05901 458 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 VEZF1Q14119 521 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 TMEM214Q6NUQ4 689 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 FAM180BQ6P0A1 224 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 SLC48A1Q6P1K1 146 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 EID3Q8N140 333 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 DTWD2Q8NBA8 298 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 NETO1Q8TDF5 533 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 ZDHHC12Q96GR4 267 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 AHCYL2Q96HN2 611 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 RNF145Q96MT1 663 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 MAP3K3Q99759 626 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 MAPKAP1Q9BPZ7 522 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 CHST8Q9H2A9 424 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 EPB41L1Q9H4G0 881 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 SLAMF7Q9NQ25 335 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 ZSCAN32Q9NX65 697 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 FAF1Q9UNN5 650 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 ENTPD4Q9Y227 616 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 DTNAQ9Y4J8 743 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 RNF215Q9Y6U7 377 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 USP34Q70CQ2 3546 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 TECTAO75443 2155 aa14.88□□□□□ -0.03
HERPUD1-201ENST00000300302 RNF103-CHMP3A0A140T963 221 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 TLCD2A6NGC4 264 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 GLOD5A6NK44 160 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 SRPX2O60687 465 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 C1QCP02747 245 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 RAP2AP10114 183 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 GLB1P16278 677 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 ALDH4A1P30038 563 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 TLX1P31314 330 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 HSPB3Q12988 150 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 ADRM1Q16186 407 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 SPDYE7PQ495Y7 208 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 C18orf63Q68DL7 685 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 FAM92BQ6ZTR7 304 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 DGLUCYQ7Z3D6 616 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 PTOV1Q86YD1 416 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 C11orf65Q8NCR3 313 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 OR5AK3PQ8NH89 298 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 EME1Q96AY2 570 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 CD180Q99467 661 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 DPH2Q9BQC3 489 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 SEMA6AQ9H2E6 1030 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 CXorf36Q9H7Y0 433 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 FAM60AQ9NP50 221 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 AGPAT4Q9NRZ5 378 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 OLAHQ9NV23 265 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 EPHA6Q9UF33 1036 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 FBXO4Q9UKT5 387 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 SAMD4AQ9UPU9 718 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 SLC22A7Q9Y694 548 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 V9GYQ6 96 aa14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 GOLGA4Q13439 2230 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 NUP214P35658 2090 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-201ENST00000300302 PGRMC2O15173 223 aa14.86□□□□□ -0.03
HERPUD1-201ENST00000300302 SH3BP5O60239 455 aa14.86□□□□□ -0.03
HERPUD1-201ENST00000300302 TPST1O60507 370 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms