RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 POLR2J3Q9H1A7 115 aaKnown RBP13.73□□□□□ -0.21
KDM1B-201ENST00000297792 TBC1D24Q9ULP9 559 aa13.73□□□□□ -0.21
KDM1B-201ENST00000297792 GSTM5P46439 218 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CNTN1Q12860 1018 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TCEA2Q15560 299 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ATAT1Q5SQI0 421 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 OR2G6Q5TZ20 316 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 PLAG1Q6DJT9 500 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 WDR53Q7Z5U6 358 aaPredicted RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 GPATCH2Q9NW75 528 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CORO2BQ9UQ03 480 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 A0A1W2PQL4 384 aaPredicted RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 SGTAO43765 313 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 XKP51811 444 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 MANFP55145 182 aaKnown RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 HOXC5Q00444 222 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 PIN1Q13526 163 aaPredicted RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CRTC2Q53ET0 693 aaPredicted RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ERAP2Q6P179 960 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 C22orf39Q6P5X5 142 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 DENND6BQ8NEG7 585 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 OR6F1Q8NGZ6 308 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TM9SF2Q99805 663 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TSSK6Q9BXA6 273 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 NLNQ9BYT8 704 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TBC1D17Q9HA65 648 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TEKT2Q9UIF3 430 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 SH2B3Q9UQQ2 575 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 PADI2Q9Y2J8 665 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 NRG2O14511 850 aaPredicted RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 PSIP1O75475 530 aaKnown RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 HOXB6P17509 224 aaKnown RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CD72P21854 359 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 GPC1P35052 558 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 AP1S2P56377 157 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TBPL1P62380 186 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ZNF763Q0D2J5 394 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 RNASE12Q5GAN4 147 aaKnown RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 DCST1Q5T197 706 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ABI3BPQ7Z7G0 1075 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 C17orf50Q8WW18 174 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TTLL2Q9BWV7 592 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 REEP4Q9H6H4 257 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CWH43Q9H720 699 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 CCDC59Q9P031 241 aaKnown RBP13.72□□□□□ -0.21
KDM1B-201ENST00000297792 TMPRSS11EQ9UL52 423 aa13.72□□□□□ -0.21
KDM1B-201ENST00000297792 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 IFNA14P01570 189 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 SDHBP21912 280 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 RAE1P78406 368 aaKnown RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 LIPJQ5W064 366 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 DDX53Q86TM3 631 aaKnown RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 TRIM69Q86WT6 500 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 NACC2Q96BF6 587 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 CRELD1Q96HD1 420 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 OR2A14Q96R47 310 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 IL20RAQ9UHF4 553 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 GSAPA4D1B5 854 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 KPNA3O00505 521 aaPredicted RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 TNFRSF21O75509 655 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 RPLP2P05387 115 aaKnown RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 CCNYL3P0C7X3 344 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 MLLT1Q03111 559 aaPredicted RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 SCN1BQ07699 218 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 TRIQKQ629K1 86 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 ARMCX6Q7L4S7 300 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 GALNT13Q8IUC8 556 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 C19orf18Q8NEA5 215 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 FAM46DQ8NEK8 389 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 RAET1EQ8TD07 263 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 KLHL6Q8WZ60 621 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 OPALINQ96PE5 141 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 BARHL1Q9BZE3 327 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 ABCG4Q9H172 646 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 MRPL17Q9NRX2 175 aaKnown RBP13.71□□□□□ -0.21
KDM1B-201ENST00000297792 SLC25A13Q9UJS0 675 aa13.71□□□□□ -0.21
KDM1B-201ENST00000297792 A0A1B0GVC2 190 aa13.71□□□□□ -0.22
KDM1B-201ENST00000297792 A6NIN4 97 aa13.71□□□□□ -0.22
KDM1B-201ENST00000297792 SLC28A2O43868 658 aa13.71□□□□□ -0.22
KDM1B-201ENST00000297792 CSO75390 466 aaKnown RBP13.71□□□□□ -0.22
KDM1B-201ENST00000297792 NME6O75414 186 aaPredicted RBP13.71□□□□□ -0.22
KDM1B-201ENST00000297792 ZNF8P17098 575 aaPredicted RBP13.71□□□□□ -0.22
KDM1B-201ENST00000297792 HOXB9P17482 250 aaPredicted RBP13.71□□□□□ -0.22
KDM1B-201ENST00000297792 DSTNP60981 165 aa13.71□□□□□ -0.22
KDM1B-201ENST00000297792 IRF5Q13568 498 aa13.71□□□□□ -0.22
KDM1B-201ENST00000297792 ARSIQ5FYB1 569 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms