RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PAPD5Q8NDF8 572 aaKnown RBP14.76□□□□□ -0.05
LSM6-201ENST00000296581 FNDC8Q8TC99 324 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 DGCR14Q96DF8 476 aaKnown RBP14.76□□□□□ -0.05
LSM6-201ENST00000296581 TAS2R7Q9NYW3 318 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 PCDHGB4Q9UN71 923 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 CORO2BQ9UQ03 480 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ASB4Q9Y574 426 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 A0A1W2PRB8 838 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 LILRA5A6NI73 299 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 GSTA4O15217 222 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 GMNNO75496 209 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 PIAS2O75928 621 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ABCB1P08183 1280 aaPredicted RBP14.76□□□□□ -0.05
LSM6-201ENST00000296581 FRKP42685 505 aaPredicted RBP14.76□□□□□ -0.05
LSM6-201ENST00000296581 SLC9A5Q14940 896 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 CPZQ66K79 652 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 RNF44Q7L0R7 432 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 OR8K5Q8NH50 307 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ZFYVE21Q9BQ24 234 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 KLHL4Q9C0H6 718 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ABCG4Q9H172 646 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ERVMER34-1Q9H9K5 563 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 TAS2R9Q9NYW1 312 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 EHD3Q9NZN3 535 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ANAPC2Q9UJX6 822 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 TNRC6BQ9UPQ9 1833 aaKnown RBP14.75□□□□□ -0.05
LSM6-201ENST00000296581 CXCR6O00574 342 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 SLC35G6P0C7Q6 338 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 PVRP15151 417 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 IL10P22301 178 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 PPP1CAP62136 330 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 SLAMF1Q13291 335 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 TBCELQ5QJ74 424 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ARMC6Q6NXE6 501 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 KLHL35Q6PF15 583 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.75□□□□□ -0.05
LSM6-201ENST00000296581 KCT2Q8NC54 265 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 FAM110BQ8TC76 370 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 LRTOMTQ8WZ04 291 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 SPATA9Q9BWV2 254 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.75□□□□□ -0.05
LSM6-201ENST00000296581 CHST8Q9H2A9 424 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 AURKCQ9UQB9 309 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 GUCY1B2O75343 617 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 KCNK5O95279 499 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 SMIM10L1P0DMW3 83 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 TYRP1P17643 537 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ALDH9A1P49189 494 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 PCBP4P57723 403 aaKnown RBP14.75□□□□□ -0.05
LSM6-201ENST00000296581 RAB8AP61006 207 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ERICH5Q6P6B1 374 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ERMP1Q7Z2K6 904 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ZNF438Q7Z4V0 828 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ZZZ3Q8IYH5 903 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 TRIML2Q8N7C3 387 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 CAMKVQ8NCB2 501 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 ADCY4Q8NFM4 1077 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 UTP15Q8TED0 518 aaKnown RBP14.75□□□□□ -0.05
LSM6-201ENST00000296581 FIG4Q92562 907 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 SMIM10Q96HG1 83 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 FAIM2Q9BWQ8 316 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 KLHL25Q9H0H3 589 aa14.75□□□□□ -0.05
LSM6-201ENST00000296581 TMEM131Q92545 1883 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 PDPK1O15530 556 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 P2RX6O15547 441 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 UBXN7O94888 489 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 RETP07949 1114 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 MVDP53602 400 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 TEAD4Q15561 434 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 DEFB133Q30KQ1 61 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 NDUFAF5Q5TEU4 345 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 HMBOX1Q6NT76 420 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 PTOV1Q86YD1 416 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 OR5P2Q8WZ92 322 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 EDAQ92838 391 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 HSPBAP1Q96EW2 488 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 SEMA6CQ9H3T2 930 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 SLAMF7Q9NQ25 335 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 DDX18Q9NVP1 670 aaKnown RBP14.74□□□□□ -0.05
LSM6-201ENST00000296581 UCKL1Q9NWZ5 548 aa14.74□□□□□ -0.05
LSM6-201ENST00000296581 LYARQ9NX58 379 aaKnown RBP14.74□□□□□ -0.05
LSM6-201ENST00000296581 LOC105369274A0A096LPK9 316 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 LOC102723532A0A0G2JNH3 316 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 A0A1B0GVT2 93 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 SDC3O75056 442 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CREG1O75629 220 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 SERPINB7O75635 380 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 TIPRLO75663 272 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CERS1P27544 350 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CTSKP43235 329 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CAPZBP47756 277 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 RGNQ15493 299 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 BCL2A1Q16548 175 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 LYSMD4Q5XG99 296 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 FRMPD2BQ6IN97 320 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 OR4N4Q8N0Y3 316 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CLEC4FQ8N1N0 589 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 CATSPER1Q8NEC5 780 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 SLC35A5Q9BS91 424 aa14.73□□□□□ -0.05
LSM6-201ENST00000296581 ROGDIQ9GZN7 287 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms