RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ZNF662Q6ZS27 426 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 CLNKQ7Z7G1 428 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 LIX1LQ8IVB5 337 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 SCUBE1Q8IWY4 988 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 PPIL6Q8IXY8 311 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 RASGEF1CQ8N431 466 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 FAM47BQ8NA70 645 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 PSD4Q8NDX1 1056 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 TRPV3Q8NET8 790 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 TRIM58Q8NG06 486 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 OR2M7Q8NG81 312 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 ASB5Q8WWX0 329 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 CSF3RQ99062 836 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 TRIM54Q9BYV2 358 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 TP63Q9H3D4 680 aaPredicted RBP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 LIME1Q9H400 295 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 PELI2Q9HAT8 420 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 KCNJ16Q9NPI9 418 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 PRTFDC1Q9NRG1 225 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 ERVK-11Q9UQG0 969 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 VWA7Q9Y334 891 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 KIAA1549Q9HCM3 1950 aa8.62□□□□□ -1.03
CNOT9-202ENST00000295701 NIPBLQ6KC79 2804 aaeCLIP8.62□□□□□ -1.03
CNOT9-202ENST00000295701 MED12Q93074 2177 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 FANCGO15287 622 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 OR2J2O76002 312 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 TBX6O95947 436 aaPredicted RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 SERPINA6P08185 405 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 HOXD4P09016 255 aaPredicted RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 SOX3P41225 446 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 IDH3AP50213 366 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 IST1P53990 364 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 AP1S2P56377 157 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 SKP1P63208 163 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 PLGLB1Q02325 96 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 PPP1R3AQ16821 1122 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 FBXO48Q5FWF7 155 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 SPANXN3Q5MJ09 141 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 RTL6Q6ICC9 239 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 ZNF585AQ6P3V2 769 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 ARHGAP11AQ6P4F7 1023 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 KIAA0408Q6ZU52 694 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 TMEM200AQ86VY9 491 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 CNTN4Q8IWV2 1026 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 KLHDC8AQ8IYD2 350 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 EID3Q8N140 333 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 TBC1D19Q8N5T2 526 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 OR5M3Q8NGP4 307 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 OR10Q1Q8NGQ4 319 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 NUDT8Q8WV74 236 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 CCT6BQ92526 530 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 CERS2Q96G23 380 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 CFAP36Q96G28 342 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 VMP1Q96GC9 406 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 AIF1LQ9BQI0 150 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 ZNF559Q9BR84 538 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 WDR83Q9BRX9 315 aaKnown RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 ZDHHC11Q9H8X9 412 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 SEMA4BQ9NPR2 832 aaPredicted RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 PPANQ9NQ55 473 aaKnown RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 PPIEQ9UNP9 301 aaKnown RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 YARS2Q9Y2Z4 477 aaKnown RBP8.61□□□□□ -1.03
CNOT9-202ENST00000295701 MMACHCQ9Y4U1 282 aa8.61□□□□□ -1.03
CNOT9-202ENST00000295701 A0A0G2JNJ9 132 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 PABPN1LA6NDY0 278 aaKnown RBP8.6□□□□□ -1.03
CNOT9-202ENST00000295701 URADA6NGE7 173 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 A8MVJ9 347 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 DNALI1O14645 258 aaPredicted RBP8.6□□□□□ -1.03
CNOT9-202ENST00000295701 ERI3O43414 337 aaKnown RBP8.6□□□□□ -1.03
CNOT9-202ENST00000295701 KLK8O60259 260 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 PRAMEF4O60810 478 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 ZFAND5O76080 213 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 TUBB4AP04350 444 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 IFNA16P05015 189 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 CELA3AP09093 270 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 C1GALT1C1LP0DN25 315 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 GLI4P10075 376 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 CD1EP15812 388 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 MAGEA5P43359 124 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 HK2P52789 917 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 PLA2G16P53816 162 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 RAB38P57729 211 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 CCZ1BP86790 482 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 CCZ1P86791 482 aaPredicted RBP8.6□□□□□ -1.03
CNOT9-202ENST00000295701 SLC13A2Q13183 592 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 BMPR2Q13873 1038 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 XP32Q5T750 250 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 PRAMEF9Q5VWM5 478 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 NIPAL1Q6NVV3 410 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 VN1R5Q7Z5H4 357 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 TMEM251Q8N6I4 163 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 DOK4Q8TEW6 326 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 PTPMT1Q8WUK0 201 aaPredicted RBP8.6□□□□□ -1.03
CNOT9-202ENST00000295701 ANKRD49Q8WVL7 239 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 ATL1Q8WXF7 558 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
CNOT9-202ENST00000295701 MS4A6EQ96DS6 147 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms