RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TCHHL1Q5QJ38 904 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 C6orf136Q5SQH8 315 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 FBXO42Q6P3S6 717 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ZCCHC7Q8N3Z6 543 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ARHGEF39Q8N4T4 335 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RHBDD1Q8TEB9 315 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RGMAQ96B86 450 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 OR52B2Q96RD2 323 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 GFM1Q96RP9 751 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CCDC106Q9BWC9 280 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NPLQ9BXD5 320 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 YY1AP1Q9H869 796 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RMND5AQ9H871 391 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 PDE7BQ9NP56 450 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CCDC167Q9P0B6 97 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 HCN3Q9P1Z3 774 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SUCOQ9UBS9 1254 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MED13LQ71F56 2210 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MAGEB17A8MXT2 336 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TBX19O60806 448 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF23P17027 643 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NELFEP18615 380 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 EPHA3P29320 983 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 GCGRP47871 477 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RPS13P62277 151 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CCL7P80098 99 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 PLGLB1Q02325 96 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 GNA13Q14344 377 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MSANTD1Q6ZTZ1 278 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF761Q86XN6 746 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SLITRK4Q8IW52 837 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 OR2L5Q8NG80 312 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 OR2I1PQ8NGU4 316 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ADAMTS18Q8TE60 1221 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 KCNC2Q96PR1 638 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 FARSBQ9NSD9 589 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 DDX18Q9NVP1 670 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 LYARQ9NX58 379 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MUC6Q6W4X9 2439 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 A0A0J9YVX5 310 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SMIM10L1P0DMW3 83 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NR2F1P10589 423 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NQO1P15559 274 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MAGP20916 626 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RRM2P31350 389 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CCKBRP32239 447 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 S100A3P33764 101 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RPL3P39023 403 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ASMTP46597 345 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CFHR1Q03591 330 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC13A2Q13183 592 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 OTUD3Q5T2D3 398 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 VWA5B1Q5TIE3 1220 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TMEM214Q6NUQ4 689 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 C6orf89Q6UWU4 347 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 FGD2Q7Z6J4 655 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 KRT77Q7Z794 578 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TRIM73Q86UV7 250 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 GLB1L3Q8NCI6 653 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NETO1Q8TDF5 533 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 FIG4Q92562 907 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SMIM10Q96HG1 83 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TGM7Q96PF1 710 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 B3GNT4Q9C0J1 378 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SAR1AQ9NR31 198 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 GALNT8Q9NY28 637 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ABI3Q9P2A4 366 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ANGPTL2Q9UKU9 493 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SLC22A7Q9Y694 548 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NUP210LQ5VU65 1888 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 IQCMA0A1B0GVH7 501 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 LRIT2A6NDA9 550 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 DLL1O00548 723 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TRAPPC6AO75865 159 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TBX6O95947 436 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 HSMCR30P0CW71 290 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ST6GAL1P15907 406 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 JAK1P23458 1154 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TRIP10Q15642 601 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CDCP2Q5VXM1 449 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NKAIN2Q5VXU1 208 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 VN1R4Q7Z5H5 301 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NUDT13Q86X67 352 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 C7orf57Q8NEG2 295 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 CLHC1Q8NHS4 586 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NEK7Q8TDX7 302 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 TMEM74Q96NL1 305 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MAP3K3Q99759 626 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 MYNNQ9NPC7 610 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 SDR39U1Q9NRG7 319 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 HEY2Q9UBP5 337 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 ZNF232Q9UNY5 417 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 RRP15Q9Y3B9 282 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 NCOR2Q9Y618 2525 aa8.01□□□□□ -1.13
PTPDC1-201ENST00000288976 A0A1W2PQM1 296 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 FEZF1A0PJY2 475 aa8□□□□□ -1.13
PTPDC1-201ENST00000288976 LCMT2O60294 686 aaKnown RBP8□□□□□ -1.13
PTPDC1-201ENST00000288976 CTSVO60911 334 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms