RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 TOP6BLQ8N6T0 577 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 VGLL2Q8N8G2 317 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 RBM15BQ8NDT2 890 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 FBXO36Q8NEA4 188 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 CMTM2Q8TAZ6 248 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ACTL9Q8TC94 416 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SMAP2Q8WU79 429 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TNFAIP8L1Q8WVP5 186 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SELENOMQ8WWX9 145 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 AP3S1Q92572 193 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ITFG2Q969R8 447 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 APH1AQ96BI3 265 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ATG101Q9BSB4 218 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 XKR8Q9H6D3 395 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.22□□□□□ -1.731e-9■■■■■ 35.7
NCOA1-201ENST00000288599 SNTG1Q9NSN8 517 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 WSB2Q9NYS7 404 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ACTR3BQ9P1U1 418 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 DHDHQ9UQ10 334 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 MMACHCQ9Y4U1 282 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 FAM205AQ6ZU69 1335 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ROBO1Q9Y6N7 1651 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 OR2AT4A6NND4 320 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 NEURL1BA8MQ27 555 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TNFSF12O43508 249 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SCO2O43819 266 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TIMM8AO60220 97 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 CST8O60676 142 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 RGS9O75916 674 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 KNG1P01042 644 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ORM1P02763 201 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TACSTD2P09758 323 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 RHOQP17081 205 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 POLR2CP19387 275 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 CPT2P23786 658 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 IL4RP24394 825 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 KIR2DL1P43626 348 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 KIR2DL2P43627 348 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SLC15A1P46059 708 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TUBP50607 506 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 HTD2P86397 168 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 XIAPP98170 497 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SLC3A1Q07837 685 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TRIM28Q13263 835 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 BTN1A1Q13410 526 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 FASTKQ14296 549 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 LIN52Q52LA3 116 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 LRRC38Q5VT99 294 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 EGFLAMQ63HQ2 1017 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 RGS7BPQ6MZT1 257 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 BLOC1S3Q6QNY0 202 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TMPRSS11FQ6ZWK6 438 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 USP49Q70CQ1 688 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SYT13Q7L8C5 426 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TRAM1L1Q8N609 369 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 PPCDCQ96CD2 204 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 LRR1Q96L50 414 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 REEP1Q9H902 201 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 L2HGDHQ9H9P8 463 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 RDH14Q9HBH5 336 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 RPS6KL1Q9Y6S9 549 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ATRNO75882 1429 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 EIF1AYO14602 144 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 CHST10O43529 356 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 DDNO94850 711 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 MAGEB1P43366 347 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 HINT1P49773 126 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 NUDT6P53370 316 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SIM1P81133 766 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TXNL4AP83876 142 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 SMAD3P84022 425 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 DSC1Q08554 894 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 FAM110CQ1W6H9 321 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 PDE12Q6L8Q7 609 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ZNF585AQ6P3V2 769 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 AHSA2Q719I0 299 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 FAM131BQ86XD5 332 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 OR52B6Q8NGF0 335 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 OR4C6Q8NH72 309 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 CEP76Q8TAP6 659 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 LPIN3Q9BQK8 851 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 GPATCH1Q9BRR8 931 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 MED28Q9H204 178 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TCF7L1Q9HCS4 588 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 WDR6Q9NNW5 1121 aaKnown RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 UFSP2Q9NUQ7 469 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 TMEM184CQ9NVA4 438 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 DCAF16Q9NXF7 216 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 FBXL3Q9UKT7 428 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 COPS3Q9UNS2 423 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 MOB4Q9Y3A3 225 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 AUP1Q9Y679 476 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ANKRD36CQ5JPF3 1778 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 COL16A1Q07092 1604 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 YJEFN3A6XGL0 299 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 UBDO15205 165 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 ATXN7O15265 892 aaPredicted RBP4.22□□□□□ -1.73
NCOA1-201ENST00000288599 OR10H3O60404 316 aa4.22□□□□□ -1.73
NCOA1-201ENST00000288599 XRCC1P18887 633 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms