RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TSTQ16762 297 aaKnown RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 ESCO2Q56NI9 601 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 ACSM2BQ68CK6 577 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 HTR3DQ70Z44 454 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 ATCAYQ86WG3 371 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 C1orf52Q8N6N3 182 aaKnown RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 IL17RCQ8NAC3 791 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 OR52N2Q8NGI0 321 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 GPR151Q8TDV0 419 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 MGLLQ99685 303 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 DPH2Q9BQC3 489 aaPredicted RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 TAPBPLQ9BX59 468 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 BBS2Q9BXC9 721 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 NIPAL2Q9H841 368 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 FZD3Q9NPG1 666 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 SGTAO43765 313 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 NBNO60934 754 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 NOS1APO75052 506 aaPredicted RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 ZNF30P17039 623 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 GZMKP49863 264 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 NUDT6P53370 316 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 CRISP3P54108 245 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 IRF8Q02556 426 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 TNK1Q13470 666 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 MPPE1Q53F39 396 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 DGKKQ5KSL6 1271 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 GDPGP1Q6ZNW5 385 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 Q6ZPB1 254 aaPredicted RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 FAM92BQ6ZTR7 304 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 VRK3Q8IV63 474 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 SLC5A8Q8N695 610 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 FBXO15Q8NCQ5 510 aaPredicted RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 OR56A3Q8NH54 315 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 SH3KBP1Q96B97 665 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 VPS35Q96QK1 796 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 TRAF4Q9BUZ4 470 aaPredicted RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 VN1R3Q9BXE9 311 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 RNF121Q9H920 327 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 C12orf10Q9HB07 376 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 RAD18Q9NS91 495 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 B4DXG7 233 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 TRIM3O75382 744 aaPredicted RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 RB1P06400 928 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 POLR2CP19387 275 aaPredicted RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 CBLP22681 906 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 LHCGRP22888 699 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 TIA1P31483 386 aaKnown RBP eCLIP9.92□□□□□ -0.828e-8■■■■□ 19.9
SKA1-201ENST00000285116 XCR1P46094 333 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 PLD1Q13393 1074 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 GAB1Q13480 694 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 ZMAT1Q5H9K5 638 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 CREB3L2Q70SY1 520 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 THOC6Q86W42 341 aaKnown RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 GRAMD2AQ8IUY3 354 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 DEDD2Q8WXF8 326 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 TIFAQ96CG3 184 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 MTERF3Q96E29 417 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 ASPNQ9BXN1 380 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 BEX2Q9BXY8 128 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 EBPLQ9BY08 206 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 TMEM245Q9H330 911 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 SUV39H2Q9H5I1 410 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 KCND3Q9UK17 655 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 DSPPQ9NZW4 1301 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 TEX51A0A1B0GUA7 166 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 LINC00854A0A1B0GVQ3 168 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 FOXE1O00358 373 aaPredicted RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 IFNA14P01570 189 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 AZGP1P25311 298 aaKnown RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 IDH2P48735 452 aaKnown RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 RORCP51449 518 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 PCBP3P57721 371 aaKnown RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 PSPHP78330 225 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 RUNX1T1Q06455 604 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 LMAN2Q12907 356 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 DOC2AQ14183 400 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 MED22Q15528 200 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 TAB1Q15750 504 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 ZNF630Q2M218 657 aaPredicted RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 TMEM201Q5SNT2 666 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 DPY19L3Q6ZPD9 716 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 SLC51BQ86UW2 128 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 OXR1Q8N573 874 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 DNAJC5GQ8N7S2 189 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 OR6K2Q8NGY2 324 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 UBASH3BQ8TF42 649 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 ASZ1Q8WWH4 475 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 GEMIN6Q8WXD5 167 aaKnown RBP9.92□□□□□ -0.82
SKA1-201ENST00000285116 TPD52L3Q96J77 140 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 FTSJ1Q9UET6 329 aa9.92□□□□□ -0.82
SKA1-201ENST00000285116 CFAP54Q96N23 3096 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 ZAR1LA6NP61 321 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 WASH3PC4AMC7 463 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 CDK2AP1O14519 115 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 SEC14L5O43304 696 aa9.91□□□□□ -0.82
SKA1-201ENST00000285116 GPX5O75715 221 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms