RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 OR4N4Q8N0Y3 316 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 GALNT4Q8N4A0 578 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 OR5AK3PQ8NH89 298 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 SLC47A1Q96FL8 570 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 SLC29A1Q99808 456 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 RAD21L1Q9H4I0 556 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 SLC35C2Q9NQQ7 365 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 C1GALT1Q9NS00 363 aa20.92■□□□□ 0.94
CCDC7-201ENST00000277657 USP34Q70CQ2 3546 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 TP53BP1Q12888 1972 aaPredicted RBP20.91■□□□□ 0.94
CCDC7-201ENST00000277657 LILRA5A6NI73 299 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 H0YGG7 62 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 PROM1O43490 865 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 UBXN7O94888 489 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 PRSS23O95084 383 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 AIFM1O95831 613 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 KDELR2P33947 212 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 PCGF2P35227 344 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 CHI3L1P36222 383 aaPredicted RBP20.91■□□□□ 0.94
CCDC7-201ENST00000277657 CRATP43155 626 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 ARF3P61204 181 aaPredicted RBP20.91■□□□□ 0.94
CCDC7-201ENST00000277657 SNRPNP63162 240 aaKnown RBP20.91■□□□□ 0.94
CCDC7-201ENST00000277657 PPP4R4Q6NUP7 873 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 DGLUCYQ7Z3D6 616 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 PYURFQ96I23 114 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 ZNF597Q96LX8 424 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 NLNQ9BYT8 704 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 ROGDIQ9GZN7 287 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 SEMA6CQ9H3T2 930 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 SIRT3Q9NTG7 399 aaPredicted RBP20.91■□□□□ 0.94
CCDC7-201ENST00000277657 RAPGEFL1Q9UHV5 662 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 UTS2RQ9UKP6 389 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 CES1P1Q9UKY3 287 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 SAMD4AQ9UPU9 718 aaKnown RBP20.91■□□□□ 0.94
CCDC7-201ENST00000277657 SNX11Q9Y5W9 270 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 CACNA1IQ9P0X4 2223 aa20.91■□□□□ 0.94
CCDC7-201ENST00000277657 URADA6NGE7 173 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 CLOCKO15516 846 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 ETFAP13804 333 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 SOAT1P35610 550 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 HSPA13P48723 471 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 C21orf59P57076 290 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 FOLH1Q04609 750 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 KLHL35Q6PF15 583 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 ZBTB49Q6ZSB9 765 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 PACRGLQ8N7B6 248 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 C11orf65Q8NCR3 313 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.9■□□□□ 0.94
CCDC7-201ENST00000277657 TMEM38AQ9H6F2 299 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 FBXW2Q9UKT8 454 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 RAB26Q9ULW5 256 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 FAF1Q9UNN5 650 aaPredicted RBP20.9■□□□□ 0.94
CCDC7-201ENST00000277657 RNF103-CHMP3A0A140T963 221 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 SAC3D1A6NKF1 404 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 PGRMC2O15173 223 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 SH3BP5O60239 455 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 PRKRAO75569 313 aaKnown RBP20.9■□□□□ 0.94
CCDC7-201ENST00000277657 PIAS2O75928 621 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 RBBP4Q09028 425 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 SUZ12Q15022 739 aaKnown RBP20.9■□□□□ 0.94
CCDC7-201ENST00000277657 MANEAQ5SRI9 462 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 SAXO2Q658L1 398 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 IRGCQ6NXR0 463 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 TSSK4Q6SA08 328 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 ANGPTL8Q6UXH0 198 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 RNF130Q86XS8 419 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 MAL2Q969L2 176 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 RERGQ96A58 199 aaPredicted RBP20.9■□□□□ 0.94
CCDC7-201ENST00000277657 NEURL3Q96EH8 262 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 MAPKAP1Q9BPZ7 522 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 BDH2Q9BUT1 245 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 ASPSCR1Q9BZE9 553 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 NTN4Q9HB63 628 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 OAZ3Q9UMX2 235 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 SNX8Q9Y5X2 465 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 AK5Q9Y6K8 562 aa20.9■□□□□ 0.94
CCDC7-201ENST00000277657 THADAQ6YHU6 1953 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 VCANP13611 3396 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 WASHC1A8K0Z3 465 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 SOCS2O14508 198 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 ACOX3O15254 700 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 ZSCAN9O15535 394 aaPredicted RBP20.89■□□□□ 0.93
CCDC7-201ENST00000277657 DEAF1O75398 565 aaPredicted RBP20.89■□□□□ 0.93
CCDC7-201ENST00000277657 PDGFBP01127 241 aaPredicted RBP20.89■□□□□ 0.93
CCDC7-201ENST00000277657 CAPZBP47756 277 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 TEAD4Q15561 434 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 NRF1Q16656 503 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 DEFB133Q30KQ1 61 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 LRRC23Q53EV4 343 aaPredicted RBP20.89■□□□□ 0.93
CCDC7-201ENST00000277657 TMTC4Q5T4D3 741 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 GCNT6Q5T4J0 391 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 C18orf63Q68DL7 685 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 SLC48A1Q6P1K1 146 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 SPRED1Q7Z699 444 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 AMDHD1Q96NU7 426 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 SERINC2Q96SA4 455 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 C9orf16Q9BUW7 83 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 TMEM121BQ9BXQ6 578 aaPredicted RBP20.89■□□□□ 0.93
CCDC7-201ENST00000277657 GLIPR2Q9H4G4 154 aa20.89■□□□□ 0.93
CCDC7-201ENST00000277657 UCKL1Q9NWZ5 548 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms